Information for 1-MGAGGTCAAAGGTCAS (Motif 1)

G T C A T A C G C T G A A C T G A C T G A C G T A T G C C G T A C T G A C T G A C T A G A C T G A C G T A T G C C G T A T A C G
Reverse Opposite:
A T G C G A C T T A C G G T C A G T A C A G T C A G C T A G C T A C G T T A C G T G C A G T A C G T A C A G C T A T G C C A G T
p-value:1e-68
log p-value:-1.566e+02
Information Content per bp:1.672
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif8.50%
Number of Background Sequences with motif170.6
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets52.5 +/- 21.2bp
Average Position of motif in Background49.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:forward strand
Alignment:MGAGGTCAAAGGTCAS
-GAGGTCAAAGGTCA-
 G T C A T A C G C T G A A C T G A C T G A C G T A T G C C G T A C T G A C T G A C T A G A C T G A C G T A T G C C G T A T A C G
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:MGAGGTCAAAGGTCAS
AGGGGTCAGAGGTCA-
 G T C A T A C G C T G A A C T G A C T G A C G T A T G C C G T A C T G A C T G A C T A G A C T G A C G T A T G C C G T A T A C G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:3
Score:0.95
Offset:1
Orientation:forward strand
Alignment:MGAGGTCAAAGGTCAS
-GAGGTCAAAGGTCA-
 G T C A T A C G C T G A A C T G A C T G A C G T A T G C C G T A C T G A C T G A C T A G A C T G A C G T A T G C C G T A T A C G
A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.93
Offset:1
Orientation:forward strand
Alignment:MGAGGTCAAAGGTCAS
-GGGGTCAAAGGTCA-
 G T C A T A C G C T G A A C T G A C T G A C G T A T G C C G T A C T G A C T G A C T A G A C T G A C G T A T G C C G T A T A C G
A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T

Rxra/MA0512.2/Jaspar

Match Rank:5
Score:0.93
Offset:1
Orientation:forward strand
Alignment:MGAGGTCAAAGGTCAS
-GGGGTCAAAGGTCA-
 G T C A T A C G C T G A A C T G A C T G A C G T A T G C C G T A C T G A C T G A C T A G A C T G A C G T A T G C C G T A T A C G
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T

RXRB/MA0855.1/Jaspar

Match Rank:6
Score:0.92
Offset:1
Orientation:forward strand
Alignment:MGAGGTCAAAGGTCAS
-GGGGTCAAAGGTCA-
 G T C A T A C G C T G A A C T G A C T G A C G T A T G C C G T A C T G A C T G A C T A G A C T G A C G T A T G C C G T A T A C G
A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.91
Offset:1
Orientation:forward strand
Alignment:MGAGGTCAAAGGTCAS
-TAGGGCAAAGGTCA-
 G T C A T A C G C T G A A C T G A C T G A C G T A T G C C G T A C T G A C T G A C T A G A C T G A C G T A T G C C G T A T A C G
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.90
Offset:0
Orientation:forward strand
Alignment:MGAGGTCAAAGGTCAS
GTAGGGCAAAGGTCA-
 G T C A T A C G C T G A A C T G A C T G A C G T A T G C C G T A C T G A C T G A C T A G A C T G A C G T A T G C C G T A T A C G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:9
Score:0.89
Offset:0
Orientation:forward strand
Alignment:MGAGGTCAAAGGTCAS-
AAAGGTCAAAGGTCAAC
 G T C A T A C G C T G A A C T G A C T G A C G T A T G C C G T A C T G A C T G A C T A G A C T G A C G T A T G C C G T A T A C G A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:MGAGGTCAAAGGTCAS
-TGGGGCAAAGGTCA-
 G T C A T A C G C T G A A C T G A C T G A C G T A T G C C G T A C T G A C T G A C T A G A C T G A C G T A T G C C G T A T A C G
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T