Information for 17-AATCTTCHCC (Motif 29)

C G T A T C G A A C G T A G T C A G C T A C G T G T A C G C T A A G T C A G T C
Reverse Opposite:
C T A G A C T G C A G T A C T G C G T A C T G A A C T G G T C A A G C T A C G T
p-value:1e-7
log p-value:-1.805e+01
Information Content per bp:1.861
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.46%
Number of Background Sequences with motif26.7
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets41.8 +/- 25.4bp
Average Position of motif in Background54.8 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AATCTTCHCC
CAAGCTT----
 A C G T C G T A T C G A A C G T A G T C A G C T A C G T G T A C G C T A A G T C A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AATCTTCHCC
--GCTTCC--
 C G T A T C G A A C G T A G T C A G C T A C G T G T A C G C T A A G T C A G T C
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AATCTTCHCC-
-----TCCCCA
 C G T A T C G A A C G T A G T C A G C T A C G T G T A C G C T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AATCTTCHCC
CTAATCCTCTT-
 A C G T A C G T C G T A T C G A A C G T A G T C A G C T A C G T G T A C G C T A A G T C A G T C
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AATCTTCHCC----
NNACTTCCTCTTNN
 C G T A T C G A A C G T A G T C A G C T A C G T G T A C G C T A A G T C A G T C A C G T A C G T A C G T A C G T
C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AATCTTCHCC-
KGCCCTTCCCCA
 A C G T C G T A T C G A A C G T A G T C A G C T A C G T G T A C G C T A A G T C A G T C A C G T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

PB0124.1_Gabpa_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AATCTTCHCC-----
CCGTCTTCCCCCTCAC
 A C G T C G T A T C G A A C G T A G T C A G C T A C G T G T A C G C T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------AATCTTCHCC--
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C G A A C G T A G T C A G C T A C G T G T A C G C T A A G T C A G T C A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AATCTTCHCC
NYTAATCCYB---
 A C G T A C G T A C G T C G T A T C G A A C G T A G T C A G C T A C G T G T A C G C T A A G T C A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------AATCTTCHCC
TTCTAGAACGTTC---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C G A A C G T A G T C A G C T A C G T G T A C G C T A A G T C A G T C
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T A C G T A C G T