Information for 10-TCTAGAGTGA (Motif 19)

A G C T A G T C A G C T C G T A C T A G C G T A C T A G A C G T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A A G T C A C G T A G T C C G A T T C G A A C T G C T G A
p-value:1e-11
log p-value:-2.615e+01
Information Content per bp:1.840
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets43.4 +/- 29.8bp
Average Position of motif in Background36.3 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TCTAGAGTGA--
--TTRAGTGSYK
 A G C T A G T C A G C T C G T A C T A G C G T A C T A G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCTAGAGTGA--
-CTTGAGTGGCT
 A G C T A G T C A G C T C G T A C T A G C G T A C T A G A C G T A C T G C G T A A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCTAGAGTGA-
-CTYRAGTGSY
 A G C T A G T C A G C T C G T A C T A G C G T A C T A G A C G T A C T G C G T A A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCTAGAGTGA-
-BTBRAGTGSN
 A G C T A G T C A G C T C G T A C T A G C G T A C T A G A C G T A C T G C G T A A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCTAGAGTGA--
--TTGAGTGSTT
 A G C T A G T C A G C T C G T A C T A G C G T A C T A G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCTAGAGTGA
--NNNANTGA
 A G C T A G T C A G C T C G T A C T A G C G T A C T A G A C G T A C T G C G T A
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCTAGAGTGA-
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A G C T A G T C A G C T C G T A C T A G C G T A C T A G A C G T A C T G C G T A A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCTAGAGTGA--
----NCGTGACN
 A G C T A G T C A G C T C G T A C T A G C G T A C T A G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCTAGAGTGA
-NTCAAGTGG
 A G C T A G T C A G C T C G T A C T A G C G T A C T A G A C G T A C T G C G T A
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TCTAGAGTGA
BCNGGTTCTAGANCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G C T C G T A C T A G C G T A C T A G A C G T A C T G C G T A
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T