Information for 12-RTTCCCTTCGGCAGCC (Motif 18)

C T A G A C G T A C G T A G T C A G T C A G T C A C G T A G C T A G T C A C T G A C T G A T G C C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G G T A C A C G T A T C G A G T C G T A C A C T G C T G A C G T A A C T G A C T G A C T G C G T A C G T A A G C T
p-value:1e-8
log p-value:-1.916e+01
Information Content per bp:1.898
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 15.1bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RTTCCCTTCGGCAGCC
ATGCCCTGAGGC----
 C T A G A C G T A C G T A G T C A G T C A G T C A C G T A G C T A G T C A C T G A C T G A T G C C G T A A C T G A G T C A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RTTCCCTTCGGCAGCC
NTCCCCTCAGGGANT-
 C T A G A C G T A C G T A G T C A G T C A G T C A C G T A G C T A G T C A C T G A C T G A T G C C G T A A C T G A G T C A G T C
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--RTTCCCTTCGGCAGCC
AAATTCCCCCCGGAAGT-
 A C G T A C G T C T A G A C G T A C G T A G T C A G T C A G T C A C G T A G C T A G T C A C T G A C T G A T G C C G T A A C T G A G T C A G T C
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RTTCCCTTCGGCAGCC
WTGSCCTSAGGS----
 C T A G A C G T A C G T A G T C A G T C A G T C A C G T A G C T A G T C A C T G A C T G A T G C C G T A A C T G A G T C A G T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:RTTCCCTTCGGCAGCC
ANTCCCTNGGGAAT--
 C T A G A C G T A C G T A G T C A G T C A G T C A C G T A G C T A G T C A C T G A C T G A T G C C G T A A C T G A G T C A G T C
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:RTTCCCTTCGGCAGCC
ATTGCCTCAGGCAAT-
 C T A G A C G T A C G T A G T C A G T C A G T C A C G T A G C T A G T C A C T G A C T G A T G C C G T A A C T G A G T C A G T C
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RTTCCCTTCGGCAGCC
-TTCCCGCCWG-----
 C T A G A C G T A C G T A G T C A G T C A G T C A C G T A G C T A G T C A C T G A C T G A T G C C G T A A C T G A G T C A G T C
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:RTTCCCTTCGGCAGCC
NTCGCCTCAGGCAAT-
 C T A G A C G T A C G T A G T C A G T C A G T C A C G T A G C T A G T C A C T G A C T G A T G C C G T A A C T G A G T C A G T C
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:RTTCCCTTCGGCAGCC
-TGCCCCCGGGCA---
 C T A G A C G T A C G T A G T C A G T C A G T C A C G T A G C T A G T C A C T G A C T G A T G C C G T A A C T G A G T C A G T C
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:RTTCCCTTCGGCAGCC
NTNGCCTCAGGCNNN-
 C T A G A C G T A C G T A G T C A G T C A G T C A C G T A G C T A G T C A C T G A C T G A T G C C G T A A C T G A G T C A G T C
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T