Information for 7-TGTCAGCTTCCTG (Motif 10)

A C G T A C T G A C G T A G T C C G T A A C T G A T G C A C G T A C G T A T G C A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G A T C G C G T A C G T A A T C G A G T C A C G T A C T G C G T A A G T C C G T A
p-value:1e-10
log p-value:-2.477e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.4 +/- 24.9bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGTCAGCTTCCTG
TGTCANYT-----
 A C G T A C T G A C G T A G T C C G T A A C T G A T G C A C G T A C G T A T G C A G T C A C G T A T C G
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAGCTTCCTG
VBTGWCAGCB-----
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A T G C A C G T A C G T A T G C A G T C A C G T A T C G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TGTCAGCTTCCTG-
----CACTTCCTGT
 A C G T A C T G A C G T A G T C C G T A A C T G A T G C A C G T A C G T A T G C A G T C A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTCAGCTTCCTG
NTGTCAN-------
 A C G T A C G T A C T G A C G T A G T C C G T A A C T G A T G C A C G T A C G T A T G C A G T C A C G T A T C G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTCAGCTTCCTG
GKVTCADRTTWC--
 A C G T A C G T A C T G A C G T A G T C C G T A A C T G A T G C A C G T A C G T A T G C A G T C A C G T A T C G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTCAGCTTCCTG
YTGWCADY------
 A C G T A C G T A C T G A C G T A G T C C G T A A C T G A T G C A C G T A C G T A T G C A G T C A C G T A T C G
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGTCAGCTTCCTG--
-----ACTTCCTGTT
 A C G T A C T G A C G T A G T C C G T A A C T G A T G C A C G T A C G T A T G C A G T C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTCAGCTTCCTG
GKMTCADRTTWC--
 A C G T A C G T A C T G A C G T A G T C C G T A A C T G A T G C A C G T A C G T A T G C A G T C A C G T A T C G
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TGTCAGCTTCCTG--
-----ATTTCCTGTN
 A C G T A C T G A C G T A G T C C G T A A C T G A T G C A C G T A C G T A T G C A G T C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TGTCAGCTTCCTG
GATATTGACAGCTGCGT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A T G C A C G T A C G T A T G C A G T C A C G T A T C G
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T