Information for 4-RTGATGCAAT (Motif 3)

T C A G C A G T C A T G C G T A C A G T A T C G G A T C G T C A C G T A A G C T
Reverse Opposite:
T C G A C G A T C A G T C T A G T A G C G T C A G C A T G T A C G T C A A G T C
p-value:1e-22
log p-value:-5.111e+01
Information Content per bp:1.594
Number of Target Sequences with motif141.0
Percentage of Target Sequences with motif15.82%
Number of Background Sequences with motif3060.2
Percentage of Background Sequences with motif6.39%
Average Position of motif in Targets50.5 +/- 26.7bp
Average Position of motif in Background49.9 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:RTGATGCAAT
MTGATGCAAT
 T C A G C A G T C A T G C G T A C A G T A T C G G A T C G T C A C G T A A G C T
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:RTGATGCAAT
ATGATGCAAT
 T C A G C A G T C A T G C G T A C A G T A T C G G A T C G T C A C G T A A G C T
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-RTGATGCAAT
NATGTTGCAA-
 A C G T T C A G C A G T C A T G C G T A C A G T A T C G G A T C G T C A C G T A A G C T
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

ATF4/MA0833.1/Jaspar

Match Rank:4
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--RTGATGCAAT-
GGATGATGCAATA
 A C G T A C G T T C A G C A G T C A T G C G T A C A G T A T C G G A T C G T C A C G T A A G C T A C G T
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-RTGATGCAAT
NATTGTGCAAT
 A C G T T C A G C A G T C A T G C G T A C A G T A T C G G A T C G T C A C G T A A G C T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:RTGATGCAAT
-TTATGCAAT
 T C A G C A G T C A T G C G T A C A G T A T C G G A T C G T C A C G T A A G C T
A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:7
Score:0.80
Offset:0
Orientation:forward strand
Alignment:RTGATGCAAT
RTTATGYAAB
 T C A G C A G T C A T G C G T A C A G T A T C G G A T C G T C A C G T A A G C T
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

JUN/MA0488.1/Jaspar

Match Rank:8
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---RTGATGCAAT
AAGATGATGTCAT
 A C G T A C G T A C G T T C A G C A G T C A T G C G T A C A G T A T C G G A T C G T C A C G T A A G C T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:RTGATGCAAT---
-AGATGCAATCCC
 T C A G C A G T C A T G C G T A C A G T A T C G G A T C G T C A C G T A A G C T A C G T A C G T A C G T
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:10
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----RTGATGCAAT-
AAAGATGATGTCATC
 A C G T A C G T A C G T A C G T T C A G C A G T C A T G C G T A C A G T A T C G G A T C G T C A C G T A A G C T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C