Information for 9-CTTTTHTTTGCCTTTT (Motif 8)

A T G C A G C T A C G T A C G T C A G T G A C T A G C T A G C T A C G T C T A G T G A C A G T C A G C T A G C T A C G T C G A T
Reverse Opposite:
C G T A T G C A T C G A C T G A A C T G A C T G A G T C G T C A C T G A C T G A C T G A G T C A G T C A G T C A C T G A A T C G
p-value:1e-11
log p-value:-2.589e+01
Information Content per bp:1.756
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.4 +/- 27.9bp
Average Position of motif in Background44.1 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.68
Offset:7
Orientation:reverse strand
Alignment:CTTTTHTTTGCCTTTT
-------TTGACTTTT
 A T G C A G C T A C G T A C G T C A G T G A C T A G C T A G C T A C G T C T A G T G A C A G T C A G C T A G C T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTTTTHTTTGCCTTTT---
---NNATTGGACTTTNGNN
 A T G C A G C T A C G T A C G T C A G T G A C T A G C T A G C T A C G T C T A G T G A C A G T C A G C T A G C T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTTTTHTTTGCCTTTT
---NNACTTGCCTT--
 A T G C A G C T A C G T A C G T C A G T G A C T A G C T A G C T A C G T C T A G T G A C A G T C A G C T A G C T A C G T C G A T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CTTTTHTTTGCCTTTT--
--------AACCTTATAT
 A T G C A G C T A C G T A C G T C A G T G A C T A G C T A G C T A C G T C T A G T G A C A G T C A G C T A G C T A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CTTTTHTTTGCCTTTT
-----BNTGDCCTTG-
 A T G C A G C T A C G T A C G T C A G T G A C T A G C T A G C T A C G T C T A G T G A C A G T C A G C T A G C T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CTTTTHTTTGCCTTTT----
--------TGACCTTTNCNT
 A T G C A G C T A C G T A C G T C A G T G A C T A G C T A G C T A C G T C T A G T G A C A G T C A G C T A G C T A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTTTTHTTTGCCTTTT----
----NNNNTGACCTTTNNNN
 A T G C A G C T A C G T A C G T C A G T G A C T A G C T A G C T A C G T C T A G T G A C A G T C A G C T A G C T A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.50
Offset:10
Orientation:forward strand
Alignment:CTTTTHTTTGCCTTTT------
----------CCTTTTATAGNC
 A T G C A G C T A C G T A C G T C A G T G A C T A G C T A G C T A C G T C T A G T G A C A G T C A G C T A G C T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CTTTTHTTTGCCTTTT-
-------CTGACCTTTG
 A T G C A G C T A C G T A C G T C A G T G A C T A G C T A G C T A C G T C T A G T G A C A G T C A G C T A G C T A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTHTTTGCCTTTT
TGACCTTTANTTGACCT--
 A C G T A C G T A C G T A T G C A G C T A C G T A C G T C A G T G A C T A G C T A G C T A C G T C T A G T G A C A G T C A G C T A G C T A C G T C G A T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T A C G T A C G T