Information for 3-AAAATGCAAAAAG (Motif 6)

C T G A G T C A C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A T C G
Reverse Opposite:
A T G C A C G T C G A T A C G T C G A T A C G T A C T G A G T C C G T A C G A T A C G T A C G T A G C T
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.885
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif6.10%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.8 +/- 20.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAAATGCAAAAAG--
CAATTGCAAAAATAT
 C T G A G T C A C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A T C G A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAAATGCAAAAAG
-ATATGCAAAT--
 C T G A G T C A C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A T C G
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AAAATGCAAAAAG-
-ATATGCAAATNNN
 C T G A G T C A C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A T C G A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AAAATGCAAAAAG
-TTATGCAAAT--
 C T G A G T C A C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A T C G
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AAAATGCAAAAAG
GAAAAAATTGCAAGG--
 A C G T A C G T A C G T A C G T C T G A G T C A C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A T C G
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAATGCAAAAAG
AATATGCAAATT-
 C T G A G T C A C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A T C G
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAAATGCAAAAAG
--AATGGAAAAT-
 C T G A G T C A C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A T C G
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AAAATGCAAAAAG
--TATGCAAAT--
 C T G A G T C A C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A T C G
A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAAATGCAAAAAG
--TATGCAAAT--
 C T G A G T C A C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A T C G
A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAATGCAAAAAG--
TTGTATGCAAATTAGA
 A C G T C T G A G T C A C G T A C G T A A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A T C G A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A