Information for 3-SCMSWGCAGATYCYSS (Motif 7)

T A G C A T G C G T C A A T G C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C G A C T A T C G T A C G
Reverse Opposite:
A T G C A T G C C T G A A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C C G A T T A C G A C G T A T C G A T C G
p-value:1e-13
log p-value:-3.061e+01
Information Content per bp:1.798
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 28.5bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:SCMSWGCAGATYCYSS
---SDGCAGGTGCNS-
 T A G C A T G C G T C A A T G C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C G A C T A T C G T A C G
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:SCMSWGCAGATYCYSS
----AGCAGCTGCT--
 T A G C A T G C G T C A A T G C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C G A C T A T C G T A C G
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----SCMSWGCAGATYCYSS
AATCGCACTGCATTCCG---
 A C G T A C G T A C G T A C G T T A G C A T G C G T C A A T G C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C G A C T A T C G T A C G
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:SCMSWGCAGATYCYSS
----AACAGATGGT--
 T A G C A T G C G T C A A T G C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C G A C T A T C G T A C G
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SCMSWGCAGATYCYSS--
-CTCAGCAGCTGCTACTG
 T A G C A T G C G T C A A T G C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C G A C T A T C G T A C G A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SCMSWGCAGATYCYSS--
-AAGGCCAGATGGTCCGG
 T A G C A T G C G T C A A T G C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C G A C T A T C G T A C G A C G T A C G T
A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:SCMSWGCAGATYCYSS---
----AGATGCTRCTRCCHT
 T A G C A T G C G T C A A T G C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C G A C T A T C G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:SCMSWGCAGATYCYSS
----CGCAGCTGCG--
 T A G C A T G C G T C A A T G C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C G A C T A T C G T A C G
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:SCMSWGCAGATYCYSS
----AACAGATGGC--
 T A G C A T G C G T C A A T G C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C G A C T A T C G T A C G
A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:SCMSWGCAGATYCYSS
----AGCAGCTGCTNN
 T A G C A T G C G T C A A T G C C G T A A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C G A C T A T C G T A C G
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C