Information for 8-AKCCAGGAGCMTG (Motif 6)

C G T A C A T G A G T C T A G C C G T A A C T G A C T G C G T A A C T G A G T C G T A C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C T A G A G T C A C G T A G T C A G T C A C G T A C T G A C T G G T A C A C G T
p-value:1e-13
log p-value:-3.161e+01
Information Content per bp:1.914
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 25.9bp
Average Position of motif in Background46.1 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AKCCAGGAGCMTG
----CGGAGC---
 C G T A C A T G A G T C T A G C C G T A A C T G A C T G C G T A A C T G A G T C G T A C A C G T A C T G
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AKCCAGGAGCMTG
-GACAGGTGTN--
 C G T A C A T G A G T C T A G C C G T A A C T G A C T G C G T A A C T G A G T C G T A C A C G T A C T G
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AKCCAGGAGCMTG
-NNCAGGTGCG--
 C G T A C A T G A G T C T A G C C G T A A C T G A C T G C G T A A C T G A G T C G T A C A C G T A C T G
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AKCCAGGAGCMTG
-NNCAGGTGNN--
 C G T A C A T G A G T C T A G C C G T A A C T G A C T G C G T A A C T G A G T C G T A C A C G T A C T G
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AKCCAGGAGCMTG
GRTGMTRGAGCC--
 A C G T C G T A C A T G A G T C T A G C C G T A A C T G A C T G C G T A A C T G A G T C G T A C A C G T A C T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AKCCAGGAGCMTG
-NNCAGGTGTN--
 C G T A C A T G A G T C T A G C C G T A A C T G A C T G C G T A A C T G A G T C G T A C A C G T A C T G
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AKCCAGGAGCMTG-
NNNTTAGGTAGCNTNT
 A C G T A C G T C G T A C A T G A G T C T A G C C G T A A C T G A C T G C G T A A C T G A G T C G T A C A C G T A C T G A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AKCCAGGAGCMTG
--VCAGGTRDRY-
 C G T A C A T G A G T C T A G C C G T A A C T G A C T G C G T A A C T G A G T C G T A C A C G T A C T G
A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AKCCAGGAGCMTG
-ANCAGGATGT--
 C G T A C A T G A G T C T A G C C G T A A C T G A C T G C G T A A C T G A G T C G T A C A C G T A C T G
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AKCCAGGAGCMTG--
ATCCACAGGTGCGAAAA
 A C G T A C G T C G T A C A T G A G T C T A G C C G T A A C T G A C T G C G T A A C T G A G T C G T A C A C G T A C T G A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A