Information for 4-GAVAGGCCCTCCCDGA (Motif 10)

C T A G C T G A T A C G C G T A A C T G A C T G A T G C A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G G T C A
Reverse Opposite:
A C G T A G T C G C A T A C T G C T A G A C T G G T C A A C T G A C T G A T C G A G T C A G T C C G A T A G T C A G C T A G T C
p-value:1e-10
log p-value:-2.481e+01
Information Content per bp:1.835
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 23.3bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5/MA0599.1/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GAVAGGCCCTCCCDGA
----GCCCCGCCCC--
 C T A G C T G A T A C G C G T A A C T G A C T G A T G C A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G G T C A
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GAVAGGCCCTCCCDGA
---GGCCACRCCCMK-
 C T A G C T G A T A C G C G T A A C T G A C T G A T G C A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G G T C A
A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GAVAGGCCCTCCCDGA
----GGACCACCCACG
 C T A G C T G A T A C G C G T A A C T G A C T G A T G C A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G G T C A
A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GAVAGGCCCTCCCDGA
GGAGAAAGGTGCGA-----
 A C G T A C G T A C G T C T A G C T G A T A C G C G T A A C T G A C T G A T G C A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G G T C A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GAVAGGCCCTCCCDGA
----GCCMCRCCCH--
 C T A G C T G A T A C G C G T A A C T G A C T G A T G C A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G G T C A
A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAVAGGCCCTCCCDGA--
-ANNTNCCCACCCANNAC
 C T A G C T G A T A C G C G T A A C T G A C T G A T G C A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G G T C A A C G T A C G T
A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAVAGGCCCTCCCDGA-
-NNAGTCCCACTCNNNN
 C T A G C T G A T A C G C G T A A C T G A C T G A T G C A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G G T C A A C G T
A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAVAGGCCCTCCCDGA
AGAAATGACTTCCCT--
 A C G T C T A G C T G A T A C G C G T A A C T G A C T G A T G C A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G G T C A
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GAVAGGCCCTCCCDGA
----GCCCCACCCA--
 C T A G C T G A T A C G C G T A A C T G A C T G A T G C A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G G T C A
A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GAVAGGCCCTCCCDGA
--NAGCCCCGCCCCCN
 C T A G C T G A T A C G C G T A A C T G A C T G A T G C A G T C A G T C A C G T A G T C A G T C A G T C C G T A A C T G G T C A
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T