Information for 8-CAACGTGTCTGTG (Motif 7)

A G T C C G T A C T G A A T G C A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C C G T A A C T G T C G A A G T C C G T A A G T C A T C G A G C T C G A T A C T G
p-value:1e-10
log p-value:-2.502e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 28.4bp
Average Position of motif in Background41.0 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAACGTGTCTGTG
--VBSYGTCTGG-
 A G T C C G T A C T G A A T G C A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T A C T G
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAACGTGTCTGTG
----CTGTCTGG-
 A G T C C G T A C T G A A T G C A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Hes2/MA0616.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAACGTGTCTGTG
GCACGTGTCNNNN
 A G T C C G T A C T G A A T G C A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T A C T G
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAACGTGTCTGTG
----TWGTCTGV-
 A G T C C G T A C T G A A T G C A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAACGTGTCTGTG
GCCACGTGT-----
 A C G T A G T C C G T A C T G A A T G C A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T A C T G
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAACGTGTCTGTG
GGCACGTGTC----
 A C G T A G T C C G T A C T G A A T G C A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T A C T G
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAACGTGTCTGTG
GCCACGTG------
 A C G T A G T C C G T A C T G A A T G C A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T A C T G
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAACGTGTCTGTG
-CACGTG------
 A G T C C G T A C T G A A T G C A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T A C T G
A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAACGTGTCTGTG
NCCACGTG------
 A C G T A G T C C G T A C T G A A T G C A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T A C T G
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAACGTGTCTGTG----
NNTNNTGTCTGGNNTNG
 A G T C C G T A C T G A A T G C A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G