p-value: | 1e-5 |
log p-value: | -1.298e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.47% |
Number of Background Sequences with motif | 6.0 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 46.5 +/- 22.6bp |
Average Position of motif in Background | 41.1 +/- 22.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer
Match Rank: | 1 |
Score: | 0.77 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CCAAAGTACA CANAGNNCAAAGTCCA |
|
|
|
HNF4G/MA0484.1/Jaspar
Match Rank: | 2 |
Score: | 0.76 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCAAAGTACA AGAGTCCAAAGTCCA |
|
|
|
PB0134.1_Hnf4a_2/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCAAAGTACA---- GGCAAAAGTCCAATAA |
|
|
|
Hnf4a/MA0114.3/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCAAAGTACA-- GGGGTCAAAGTCCAAT |
|
|
|
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 5 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCAAAGTACA- -CAAAGGTCAG |
|
|
|
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCAAAGTACA---- TGCCAAAATAAACANN |
|
|
|
PB0152.1_Nkx3-1_2/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCAAAGTACA------ TTCNAAGTACTTNNNNN |
|
|
|
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCAAAGTACA- -CCAGGAACAG |
|
|
|
PB0053.1_Rara_1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCAAAGTACA---- TCTCAAAGGTCACCTG |
|
|
|
Foxa2/MA0047.2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCAAAGTACA-- NCTAAGTAAACA |
|
|
|