Information for 5-TGCWGGGAMWTYC (Motif 8)

C A G T A T C G G T A C C G A T A C T G C A T G C T A G T C G A G T C A C G A T A C G T A G C T T A G C
Reverse Opposite:
A T C G T C G A C G T A G C T A C A G T A G C T A G T C G T A C T G A C G C T A C A T G T A G C G T C A
p-value:1e-14
log p-value:-3.301e+01
Information Content per bp:1.583
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.91%
Number of Background Sequences with motif1285.2
Percentage of Background Sequences with motif2.65%
Average Position of motif in Targets50.3 +/- 25.6bp
Average Position of motif in Background49.8 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:TGCWGGGAMWTYC-
----GGGAATTTCC
 C A G T A T C G G T A C C G A T A C T G C A T G C T A G T C G A G T C A C G A T A C G T A G C T T A G C A C G T
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.72
Offset:4
Orientation:forward strand
Alignment:TGCWGGGAMWTYC-
----GGGGATTTCC
 C A G T A T C G G T A C C G A T A C T G C A T G C T A G T C G A G T C A C G A T A C G T A G C T T A G C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TGCWGGGAMWTYC-
----GGGAATTTCC
 C A G T A T C G G T A C C G A T A C T G C A T G C T A G T C G A G T C A C G A T A C G T A G C T T A G C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGCWGGGAMWTYC-
--NGGGGATTTCCC
 C A G T A T C G G T A C C G A T A C T G C A T G C T A G T C G A G T C A C G A T A C G T A G C T T A G C A C G T
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TGCWGGGAMWTYC
---GGGGATTTCC
 C A G T A T C G G T A C C G A T A C T G C A T G C T A G T C G A G T C A C G A T A C G T A G C T T A G C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGCWGGGAMWTYC---
---AGGGGAATCCCCT
 C A G T A T C G G T A C C G A T A C T G C A T G C T A G T C G A G T C A C G A T A C G T A G C T T A G C A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGCWGGGAMWTYC
RGSMTBCTGGGAAAT--
 A C G T A C G T A C G T A C G T C A G T A T C G G T A C C G A T A C T G C A T G C T A G T C G A G T C A C G A T A C G T A G C T T A G C
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGCWGGGAMWTYC---
----GGGGATTCCCCC
 C A G T A T C G G T A C C G A T A C T G C A T G C T A G T C G A G T C A C G A T A C G T A G C T T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCWGGGAMWTYC
TGCTGTGATTT--
 C A G T A T C G G T A C C G A T A C T G C A T G C T A G T C G A G T C A C G A T A C G T A G C T T A G C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGCWGGGAMWTYC-----
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T C A G T A T C G G T A C C G A T A C T G C A T G C T A G T C G A G T C A C G A T A C G T A G C T T A G C A C G T A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A