Information for 5-AAAGGTCAGC (Motif 4)

T C G A T G C A C T G A A T C G A C T G A G C T G A T C C T G A T A C G G A T C
Reverse Opposite:
C T A G A T G C G A C T C T A G T C G A T G A C T A G C A G C T A C G T A G C T
p-value:1e-16
log p-value:-3.797e+01
Information Content per bp:1.659
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif926.5
Percentage of Background Sequences with motif1.91%
Average Position of motif in Targets53.6 +/- 27.8bp
Average Position of motif in Background49.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.91
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGTCAGC
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T T C G A T G C A C T G A A T C G A C T G A G C T G A T C C T G A T A C G G A T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTCAGC--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T T C G A T G C A C T G A A T C G A C T G A G C T G A T C C T G A T A C G G A T C A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----AAAGGTCAGC--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T T C G A T G C A C T G A A T C G A C T G A G C T G A T C C T G A T A C G G A T C A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTCAGC
CAAAGGTCAG-
 A C G T T C G A T G C A C T G A A T C G A C T G A G C T G A T C C T G A T A C G G A T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.81
Offset:1
Orientation:forward strand
Alignment:AAAGGTCAGC
-AAGGTCAC-
 T C G A T G C A C T G A A T C G A C T G A G C T G A T C C T G A T A C G G A T C
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGTCAGC
TCAAGGTCAN-
 A C G T T C G A T G C A C T G A A T C G A C T G A G C T G A T C C T G A T A C G G A T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTCAGC--
CAAAGGTCAAGGG
 A C G T T C G A T G C A C T G A A T C G A C T G A G C T G A T C C T G A T A C G G A T C A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AAAGGTCAGC
TRAGGTCA--
 T C G A T G C A C T G A A T C G A C T G A G C T G A T C C T G A T A C G G A T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AAAGGTCAGC
ATCAAGGTCA--
 A C G T A C G T T C G A T G C A C T G A A T C G A C T G A G C T G A T C C T G A T A C G G A T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AAAGGTCAGC
AGRGGTCA--
 T C G A T G C A C T G A A T C G A C T G A G C T G A T C C T G A T A C G G A T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T