Information for 7-ATCTGCTTTTGGCAAT (Motif 20)

C T G A A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A G T C A G T C C G T A G T C A T C G A C G T A A C T G G T A C C G T A C T A G C G T A A G C T
p-value:1e-9
log p-value:-2.153e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 30.7bp
Average Position of motif in Background66.9 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:ATCTGCTTTTGGCAAT
------NNTTGGCANN
 C T G A A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:ATCTGCTTTTGGCAAT
-------CTTGGCAA-
 C T G A A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:forward strand
Alignment:ATCTGCTTTTGGCAAT
--------TTGGCA--
 C T G A A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:ATCTGCTTTTGGCAAT
-------NTTGGCANN
 C T G A A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATCTGCTTTTGGCAAT
TTCTATTTTTAGNNN-
 C T G A A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATCTGCTTTTGGCAAT--
---ANATTTTTGCAANTN
 C T G A A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:ATCTGCTTTTGGCAAT
-------TTATGCAAT
 C T G A A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:ATCTGCTTTTGGCAAT
-GCTATTTTTAGC---
 C T G A A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A A C G T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:ATCTGCTTTTGGCAAT
------GTTGCGCAAT
 C T G A A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATCTGCTTTTGGCAAT
ATCAGCTGTT------
 C T G A A C G T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A C G T A A C G T
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T