Information for 6-AAATGTTTCAAGTTBC (Motif 8)

C T G A C G T A C G T A A C G T A C T G C G A T C G A T A C G T T G A C C G T A C G T A C T A G A G C T A C G T A T G C A G T C
Reverse Opposite:
A C T G T A C G C G T A C T G A A G T C C G A T A C G T A C T G C G T A C G T A C G T A G T A C C G T A A C G T A C G T A G C T
p-value:1e-13
log p-value:-3.081e+01
Information Content per bp:1.813
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 25.2bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAATGTTTCAAGTTBC
----GKMTCADRTTWC
 C T G A C G T A C G T A A C G T A C T G C G A T C G A T A C G T T G A C C G T A C G T A C T A G A G C T A C G T A T G C A G T C
A C G T A C G T A C G T A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AAATGTTTCAAGTTBC
----GKVTCADRTTWC
 C T G A C G T A C G T A A C G T A C T G C G A T C G A T A C G T T G A C C G T A C G T A C T A G A G C T A C G T A T G C A G T C
A C G T A C G T A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAATGTTTCAAGTTBC
TTAATNATTAAC-----
 A C G T C T G A C G T A C G T A A C G T A C T G C G A T C G A T A C G T T G A C C G T A C G T A C T A G A G C T A C G T A T G C A G T C
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAATGTTTCAAGTTBC
ATGAATAATTAATG----
 A C G T A C G T C T G A C G T A C G T A A C G T A C T G C G A T C G A T A C G T T G A C C G T A C G T A C T A G A G C T A C G T A T G C A G T C
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAATGTTTCAAGTTBC
GAAATGACTCA------
 A C G T C T G A C G T A C G T A A C G T A C T G C G A T C G A T A C G T T G A C C G T A C G T A C T A G A G C T A C G T A T G C A G T C
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAATGTTTCAAGTTBC
TTAATGTTTAACC----
 A C G T C T G A C G T A C G T A A C G T A C T G C G A T C G A T A C G T T G A C C G T A C G T A C T A G A G C T A C G T A T G C A G T C
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAATGTTTCAAGTTBC
NNANTGATTGATNTTN-
 A C G T C T G A C G T A C G T A A C G T A C T G C G A T C G A T A C G T T G A C C G T A C G T A C T A G A G C T A C G T A T G C A G T C
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAATGTTTCAAGTTBC
-AATAATT--------
 C T G A C G T A C G T A A C G T A C T G C G A T C G A T A C G T T G A C C G T A C G T A C T A G A G C T A C G T A T G C A G T C
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAATGTTTCAAGTTBC
TGAATTATGCAT-----
 A C G T C T G A C G T A C G T A A C G T A C T G C G A T C G A T A C G T T G A C C G T A C G T A C T A G A G C T A C G T A T G C A G T C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAATGTTTCAAGTTBC
-NATGTTGCAA-----
 C T G A C G T A C G T A A C G T A C T G C G A T C G A T A C G T T G A C C G T A C G T A C T A G A G C T A C G T A T G C A G T C
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T