Information for 10-TRTYMYWATTMAGRAA (Motif 21)

A C G T C T G A A C G T G A C T T G A C G A C T G C T A C G T A A C G T A C G T G T A C C G T A A C T G C T G A C G T A C G T A
Reverse Opposite:
C G A T A C G T A G C T A G T C A C G T A C T G C G T A C G T A C G A T C G A T C T G A A C T G C T G A C G T A G A C T C G T A
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.819
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 12.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0162.1_Sfpi1_2/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TRTYMYWATTMAGRAA--
----CAAATTCCGGAACC
 A C G T C T G A A C G T G A C T T G A C G A C T G C T A C G T A A C G T A C G T G T A C C G T A A C T G C T G A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TRTYMYWATTMAGRAA
TATCATAATTAAGGA-
 A C G T C T G A A C G T G A C T T G A C G A C T G C T A C G T A A C G T A C G T G T A C C G T A A C T G C T G A C G T A C G T A
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A A C G T

PH0143.1_Pou2f1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TRTYMYWATTMAGRAA
ATATATTAATTAAGTA-
 A C G T A C G T C T G A A C G T G A C T T G A C G A C T G C T A C G T A A C G T A C G T G T A C C G T A A C T G C T G A C G T A C G T A
C T G A G A C T C T A G G C A T C T G A G C A T G C A T G T C A C G T A C G A T A C G T G C T A C T G A A C T G G C A T C G T A A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TRTYMYWATTMAGRAA--
-GACCACATTCATACAAT
 A C G T C T G A A C G T G A C T T G A C G A C T G C T A C G T A A C G T A C G T G T A C C G T A A C T G C T G A C G T A C G T A A C G T A C G T
A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

NKX6-1/MA0674.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TRTYMYWATTMAGRAA
----GTAATTAA----
 A C G T C T G A A C G T G A C T T G A C G A C T G C T A C G T A A C G T A C G T G T A C C G T A A C T G C T G A C G T A C G T A
A C G T A C G T A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TRTYMYWATTMAGRAA
NNTAATTATAATTNNN---
 A C G T A C G T A C G T A C G T C T G A A C G T G A C T T G A C G A C T G C T A C G T A A C G T A C G T G T A C C G T A A C T G C T G A C G T A C G T A
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TRTYMYWATTMAGRAA
NANTATTATAATTNNN---
 A C G T A C G T A C G T A C G T C T G A A C G T G A C T T G A C G A C T G C T A C G T A A C G T A C G T G T A C C G T A A C T G C T G A C G T A C G T A
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TRTYMYWATTMAGRAA--
--AATCAATTCAATAATT
 A C G T C T G A A C G T G A C T T G A C G A C T G C T A C G T A A C G T A C G T G T A C C G T A A C T G C T G A C G T A C G T A A C G T A C G T
A C G T A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TRTYMYWATTMAGRAA
----CTAATTAA----
 A C G T C T G A A C G T G A C T T G A C G A C T G C T A C G T A A C G T A C G T G T A C C G T A A C T G C T G A C G T A C G T A
A C G T A C G T A C G T A C G T A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TRTYMYWATTMAGRAA---
-----ACATTCATGACACG
 A C G T C T G A A C G T G A C T T G A C G A C T G C T A C G T A A C G T A C G T G T A C C G T A A C T G C T G A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G