Information for 17-CGAGTTTTCT (Motif 20)

A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A C T G
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.8 +/- 13.0bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGTTTTCT-
TTTTACGACTTTCCAT
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGAGTTTTCT------
NNANTTTTATTGGNNN
 A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0064.1_Hoxb9/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGAGTTTTCT------
NGANTTTTATGGCTCN
 A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGAGTTTTCT-
----TTTTCCA
 A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGAGTTTTCT---
---ATTTTCCATT
 A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

Foxo1/MA0480.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGAGTTTTCT
TCCTGTTTACA
 A C G T A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGAGTTTTCT---
---NTTTTATTGG
 A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGAGTTTTCT---
---NTTTTATGAC
 A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGAGTTTTCT----
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGAGTTTTCT------
NNAATTTTATTGGNTN
 A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T