Information for 12-CTCTTAACAG (Motif 16)

G A T C C G A T A G T C A C G T A G C T C G T A C G T A A T G C C T G A T A C G
Reverse Opposite:
A T G C A G C T T A C G A C G T C G A T C T G A C G T A A C T G C G T A C T A G
p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.835
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif100.2
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets58.1 +/- 23.5bp
Average Position of motif in Background52.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTCTTAACAG----
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T G A T C C G A T A G T C A C G T A G C T C G T A C G T A A T G C C T G A T A C G A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CTCTTAACAG---
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C G T G A T C C G A T A G T C A C G T A G C T C G T A C G T A A T G C C T G A T A C G A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTAACAG
NSCACTYVAV--
 A C G T A C G T G A T C C G A T A G T C A C G T A G C T C G T A C G T A A T G C C T G A T A C G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTAACAG------
TCNCTTTACAGCGNNNT
 A C G T G A T C C G A T A G T C A C G T A G C T C G T A C G T A A T G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCTTAACAG
ACCACTTAA---
 A C G T A C G T G A T C C G A T A G T C A C G T A G C T C G T A C G T A A T G C C T G A T A C G
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCTTAACAG
RSCACTYRAG--
 A C G T A C G T G A T C C G A T A G T C A C G T A G C T C G T A C G T A A T G C C T G A T A C G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTCTTAACAG
AASCACTCAA---
 A C G T A C G T A C G T G A T C C G A T A G T C A C G T A G C T C G T A C G T A A T G C C T G A T A C G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTAACAG------
TCNNTTTACAGCGNNNT
 A C G T G A T C C G A T A G T C A C G T A G C T C G T A C G T A A T G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTAACAG------
TCNNTTTACAGCGNNNT
 A C G T G A T C C G A T A G T C A C G T A G C T C G T A C G T A A T G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CTCTTAACAG-
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G A T A G T C A C G T A G C T C G T A C G T A A T G C C T G A T A C G A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T