Information for 18-CGATGCATGGATT (Motif 23)

A T G C A T C G C G T A A C G T A C T G G T A C C G T A A C G T A C T G C T A G C G T A C G A T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C G T A T G C A T C G
p-value:1e-10
log p-value:-2.504e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.8 +/- 18.4bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGATGCATGGATT--
ACTATGAATGAATGAT
 A C G T A T G C A T C G C G T A A C G T A C T G G T A C C G T A A C G T A C T G C T A G C G T A C G A T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CGATGCATGGATT---
------ATTGATTYND
 A T G C A T C G C G T A A C G T A C T G G T A C C G T A A C G T A C T G C T A G C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGATGCATGGATT---
--TTGCCCGGATTAGG
 A T G C A T C G C G T A A C G T A C T G G T A C C G T A A C G T A C T G C T A G C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGATGCATGGATT-
----GCAGTGATTT
 A T G C A T C G C G T A A C G T A C T G G T A C C G T A A C G T A C T G C T A G C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGATGCATGGATT-
----NTATCGATTA
 A T G C A T C G C G T A A C G T A C T G G T A C C G T A A C G T A C T G C T A G C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGATGCATGGATT
ATGATKGATGRC--
 A C G T A T G C A T C G C G T A A C G T A C T G G T A C C G T A A C G T A C T G C T A G C G T A C G A T A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CGATGCATGGATT---
------VRGGATTARN
 A T G C A T C G C G T A A C G T A C T G G T A C C G T A A C G T A C T G C T A G C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CGATGCATGGATT--
-----NCTGGAATGC
 A T G C A T C G C G T A A C G T A C T G G T A C C G T A A C G T A C T G C T A G C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGATGCATGGATT
TGATTGATGA---
 A T G C A T C G C G T A A C G T A C T G G T A C C G T A A C G T A C T G C T A G C G T A C G A T A C G T
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CGATGCATGGATT--
-------GGGATTAA
 A T G C A T C G C G T A A C G T A C T G G T A C C G T A A C G T A C T G C T A G C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A