Information for 11-GGTACTGTTTGTA (Motif 13)

C A T G A C T G G C A T C G T A A G T C C G A T A C T G A C G T A C G T A C G T A T C G C G A T G T C A
Reverse Opposite:
C A G T C G T A T A G C G T C A T G C A C G T A G T A C C G T A C T A G C G A T C G T A T G A C G A T C
p-value:1e-12
log p-value:-2.877e+01
Information Content per bp:1.739
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.5 +/- 24.3bp
Average Position of motif in Background41.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGTACTGTTTGTA
NNGTANTGTTTTNC
 A C G T C A T G A C T G G C A T C G T A A G T C C G A T A C T G A C G T A C G T A C G T A T C G C G A T G T C A
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGTACTGTTTGTA
--TATTGTTTATT
 C A T G A C T G G C A T C G T A A G T C C G A T A C T G A C G T A C G T A C G T A T C G C G A T G T C A
A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGTACTGTTTGTA
TNNTGCTACTGTNNNN-
 A C G T A C G T A C G T A C G T C A T G A C T G G C A T C G T A A G T C C G A T A C T G A C G T A C G T A C G T A T C G C G A T G T C A
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGTACTGTTTGTA
CNNNGCTACTGTANNN-
 A C G T A C G T A C G T A C G T C A T G A C T G G C A T C G T A A G T C C G A T A C T G A C G T A C G T A C G T A T C G C G A T G T C A
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTACTGTTTGTA-
VAGRACAKNCTGTBC
 A C G T C A T G A C T G G C A T C G T A A G T C C G A T A C T G A C G T A C G T A C G T A T C G C G A T G T C A A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTACTGTTTGTA-
VAGRACAKWCTGTYC
 A C G T C A T G A C T G G C A T C G T A A G T C C G A T A C T G A C G T A C G T A C G T A T C G C G A T G T C A A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTACTGTTTGTA---
AGNACANNNTGTNCTN
 C A T G A C T G G C A T C G T A A G T C C G A T A C T G A C G T A C G T A C G T A T C G C G A T G T C A A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

NR3C2/MA0727.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGTACTGTTTGTA---
GGGAACATTGTGTTCCC
 A C G T C A T G A C T G G C A T C G T A A G T C C G A T A C T G A C G T A C G T A C G T A T C G C G A T G T C A A C G T A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGTACTGTTTGTA--
NAGAACAGNCTGTNCT
 A C G T C A T G A C T G G C A T C G T A A G T C C G A T A C T G A C G T A C G T A C G T A T C G C G A T G T C A A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGTACTGTTTGTA---
----NTGTTTAYATWW
 C A T G A C T G G C A T C G T A A G T C C G A T A C T G A C G T A C G T A C G T A T C G C G A T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A