Information for 7-GAAAGTCCTTCATGAA (Motif 11)

C A T G C G T A C G T A G C T A A C T G C G A T G A T C G T A C A G C T A C G T A G T C C G T A C A G T C T A G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C G C T A C G A T C T A G C G T A C T G A A C T G C T A G G C T A G T A C C A G T A C G T A C G T G T A C
p-value:1e-13
log p-value:-3.205e+01
Information Content per bp:1.783
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.9 +/- 24.4bp
Average Position of motif in Background66.1 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAAAGTCCTTCATGAA---
-----ACATTCATGACACG
 C A T G C G T A C G T A G C T A A C T G C G A T G A T C G T A C A G C T A C G T A G T C C G T A C A G T C T A G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

HSF2/MA0770.1/Jaspar

Match Rank:2
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GAAAGTCCTTCATGAA-----
--------TTCTAGAACGTTC
 C A T G C G T A C G T A G C T A A C T G C G A T G A T C G T A C A G C T A C G T A G T C C G T A C A G T C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAAAGTCCTTCATGAA
TNGAATTTCATTNAN---
 A C G T A C G T C A T G C G T A C G T A G C T A A C T G C G A T G A T C G T A C A G C T A C G T A G T C C G T A C A G T C T A G C G T A C G T A
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GAAAGTCCTTCATGAA--
-GACCACATTCATACAAT
 C A T G C G T A C G T A G C T A A C T G C G A T G A T C G T A C A G C T A C G T A G T C C G T A C A G T C T A G C G T A C G T A A C G T A C G T
A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

HSF1/MA0486.2/Jaspar

Match Rank:5
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GAAAGTCCTTCATGAA-----
--------TTCTAGAACGTTC
 C A T G C G T A C G T A G C T A A C T G C G A T G A T C G T A C A G C T A C G T A G T C C G T A C A G T C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

Pax6/MA0069.1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GAAAGTCCTTCATGAA
--AANTCATGCGTGAA
 C A T G C G T A C G T A G C T A A C T G C G A T G A T C G T A C A G C T A C G T A G T C C G T A C A G T C T A G C G T A C G T A
A C G T A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGTCCTTCATGAA
GGAAATTCCC-------
 A C G T C A T G C G T A C G T A G C T A A C T G C G A T G A T C G T A C A G C T A C G T A G T C C G T A C A G T C T A G C G T A C G T A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GAAAGTCCTTCATGAA
GGAAATTCCC-------
 A C G T C A T G C G T A C G T A G C T A A C T G C G A T G A T C G T A C A G C T A C G T A G T C C G T A C A G T C T A G C G T A C G T A
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.49
Offset:8
Orientation:forward strand
Alignment:GAAAGTCCTTCATGAA-------
--------TTCTAGAABNTTCTA
 C A T G C G T A C G T A G C T A A C T G C G A T G A T C G T A C A G C T A C G T A G T C C G T A C A G T C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HSF4/MA0771.1/Jaspar

Match Rank:10
Score:0.49
Offset:8
Orientation:forward strand
Alignment:GAAAGTCCTTCATGAA-----
--------TTCTAGAACGTTC
 C A T G C G T A C G T A G C T A A C T G C G A T G A T C G T A C A G C T A C G T A G T C C G T A C A G T C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C