Information for 3-ACTGCCAACT (Motif 6)

T G C A T G A C G A C T A T C G T G A C G T A C G T C A T C G A A T G C C G A T
Reverse Opposite:
G C T A A T C G A G C T C A G T A C T G A C T G A T G C C T G A A C T G A C G T
p-value:1e-11
log p-value:-2.609e+01
Information Content per bp:1.652
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif7.96%
Number of Background Sequences with motif1540.8
Percentage of Background Sequences with motif3.21%
Average Position of motif in Targets49.1 +/- 24.5bp
Average Position of motif in Background48.3 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:ACTGCCAACT
-ATGCCAACC
 T G C A T G A C G A C T A T C G T G A C G T A C G T C A T C G A A T G C C G A T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:ACTGCCAACT
GGTGCCAAGT
 T G C A T G A C G A C T A T C G T G A C G T A C G T C A T C G A A T G C C G A T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ACTGCCAACT
CGTGCCAAG-
 T G C A T G A C G A C T A T C G T G A C G T A C G T C A T C G A A T G C C G A T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:ACTGCCAACT
-ATGCCCACC
 T G C A T G A C G A C T A T C G T G A C G T A C G T C A T C G A A T G C C G A T
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ACTGCCAACT
-TTGCCAAG-
 T G C A T G A C G A C T A T C G T G A C G T A C G T C A T C G A A T G C C G A T
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ACTGCCAACT
--TGCCAA--
 T G C A T G A C G A C T A T C G T G A C G T A C G T C A T C G A A T G C C G A T
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ACTGCCAACT----
ACTATGCCAACCTACC
 A C G T A C G T T G C A T G A C G A C T A T C G T G A C G T A C G T C A T C G A A T G C C G A T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACTGCCAACT
--TGTCANYT
 T G C A T G A C G A C T A T C G T G A C G T A C G T C A T C G A A T G C C G A T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACTGCCAACT
CCAACTGCCA---
 A C G T A C G T A C G T T G C A T G A C G A C T A T C G T G A C G T A C G T C A T C G A A T G C C G A T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ACTGCCAACT
-CTGCCCGCA
 T G C A T G A C G A C T A T C G T G A C G T A C G T C A T C G A A T G C C G A T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A