Information for 6-CGCGGCTGACGGCGGT (Motif 15)

A T G C A T C G A G T C A C T G A C T G G T A C A G C T A C T G C T G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C T G A G T C G T A C A C T G A G C T A G T C C T G A A C T G A G T C A G T C A C T G A T G C A T C G
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 6.8bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGCGGCTGACGGCGGT
-GGGGCCCAAGGGGG-
 A T G C A T C G A G T C A C T G A C T G G T A C A G C T A C T G C T G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T
A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:2
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CGCGGCTGACGGCGGT--
------TGACAGCTGTCA
 A T G C A T C G A G T C A C T G A C T G G T A C A G C T A C T G C T G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:CGCGGCTGACGGCGGT--
---------TTGCGGTTT
 A T G C A T C G A G T C A C T G A C T G G T A C A G C T A C T G C T G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGCGGCTGACGGCGGT
GTCATGCHTGRCTGS---
 A C G T A C G T A T G C A T C G A G T C A C T G A C T G G T A C A G C T A C T G C T G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CGCGGCTGACGGCGGT-
------TAATGGCGGNC
 A T G C A T C G A G T C A C T G A C T G G T A C A G C T A C T G C T G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.50
Offset:10
Orientation:forward strand
Alignment:CGCGGCTGACGGCGGT--
----------GGCVGTTR
 A T G C A T C G A G T C A C T G A C T G G T A C A G C T A C T G C T G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CGCGGCTGACGGCGGT---
-------NTCGGTGGTCGC
 A T G C A T C G A G T C A C T G A C T G G T A C A G C T A C T G C T G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

TGIF2/MA0797.1/Jaspar

Match Rank:8
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CGCGGCTGACGGCGGT--
------TGACAGCTGTCA
 A T G C A T C G A G T C A C T G A C T G G T A C A G C T A C T G C T G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

PKNOX1/MA0782.1/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CGCGGCTGACGGCGGT--
------TGACAGGTGTCA
 A T G C A T C G A G T C A C T G A C T G G T A C A G C T A C T G C T G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CGCGGCTGACGGCGGT--
---GGGNGGGGGCGGGGC
 A T G C A T C G A G T C A C T G A C T G G T A C A G C T A C T G C T G A A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C