p-value: | 1e-9 |
log p-value: | -2.228e+01 |
Information Content per bp: | 1.702 |
Number of Target Sequences with motif | 38.0 |
Percentage of Target Sequences with motif | 4.16% |
Number of Background Sequences with motif | 596.1 |
Percentage of Background Sequences with motif | 1.23% |
Average Position of motif in Targets | 45.5 +/- 25.3bp |
Average Position of motif in Background | 49.8 +/- 27.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCCTGCTKGCAAA CCCCCTGCTGTG--- |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCCTGCTKGCAAA GGCCYCCTGCTGDGH-- |
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TFAP2B(var.3)/MA0813.1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCCTGCTKGCAAA TGCCCTGAGGGCA-- |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCCTGCTKGCAAA CCACACAGCAGGAGA- |
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TFAP2A(var.3)/MA0872.1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCCTGCTKGCAAA TGCCCNNAGGGCA-- |
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TFAP2C(var.3)/MA0815.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCCTGCTKGCAAA TGCCCTGAGGGCA-- |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCCTGCTKGCAAA DCTCAGCAGG---- |
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BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -10 |
Orientation: | forward strand |
Alignment: | ----------CCCTGCTKGCAAA CNNBRGCGCCCCCTGSTGGC--- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCCTGCTKGCAAA CCACACAGCAGGAGA- |
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CTCF/MA0139.1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------CCCTGCTKGCAAA TAGCGCCCCCTGGTGGCCA- |
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