Information for 5-CCCTGGGAGTTGWRGT (Motif 6)

A G T C A T G C A G T C A G C T A C T G C T A G T A C G C G T A T A C G C G A T A C G T A C T G C G A T C T G A A T C G A C G T
Reverse Opposite:
C G T A A T G C A G C T G C T A A G T C C G T A C G T A A T G C A C G T A T G C A G T C A G T C C T G A A C T G T A C G C T A G
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.777
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif50.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.3 +/- 24.2bp
Average Position of motif in Background46.1 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGAGTTGWRGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A G T C A T G C A G T C A G C T A C T G C T A G T A C G C G T A T A C G C G A T A C G T A C T G C G A T C T G A A T C G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGAGTTGWRGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A G T C A T G C A G T C A G C T A C T G C T A G T A C G C G T A T A C G C G A T A C G T A C T G C G A T C T G A A T C G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:CCCTGGGAGTTGWRGT
----GGGAATTGTAGT
 A G T C A T G C A G T C A G C T A C T G C T A G T A C G C G T A T A C G C G A T A C G T A C T G C G A T C T G A A T C G A C G T
A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCCTGGGAGTTGWRGT
---TGGCAGTTGN---
 A G T C A T G C A G T C A G C T A C T G C T A G T A C G C G T A T A C G C G A T A C G T A C T G C G A T C T G A A T C G A C G T
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCCTGGGAGTTGWRGT
NNNTGGCAGTTGGTNN
 A G T C A T G C A G T C A G C T A C T G C T A G T A C G C G T A T A C G C G A T A C G T A C T G C G A T C T G A A T C G A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCCTGGGAGTTGWRGT
---TGGCAGTTGG---
 A G T C A T G C A G T C A G C T A C T G C T A G T A C G C G T A T A C G C G A T A C G T A C T G C G A T C T G A A T C G A C G T
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGGGAGTTGWRGT
RGSMTBCTGGGAAAT-----
 A C G T A C G T A C G T A C G T A G T C A T G C A G T C A G C T A C T G C T A G T A C G C G T A T A C G C G A T A C G T A C T G C G A T C T G A A T C G A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCCTGGGAGTTGWRGT
-CACGGCAGTTGGTNN
 A G T C A T G C A G T C A G C T A C T G C T A G T A C G C G T A T A C G C G A T A C G T A C T G C G A T C T G A A T C G A C G T
A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CCCTGGGAGTTGWRGT---
-------NNHTGTGGTTWN
 A G T C A T G C A G T C A G C T A C T G C T A G T A C G C G T A T A C G C G A T A C G T A C T G C G A T C T G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CCCTGGGAGTTGWRGT--
--------GCTGTGGTTT
 A G T C A T G C A G T C A G C T A C T G C T A G T A C G C G T A T A C G C G A T A C G T A C T G C G A T C T G A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T