Information for 12-TCCAATCCCTCCA (Motif 23)

A G C T A G T C G A T C C G T A C G T A A C G T A G T C A G T C A G T C C G A T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C G T C T A G A C T G C T G A
p-value:1e-5
log p-value:-1.372e+01
Information Content per bp:1.937
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.5 +/- 38.7bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0137.1_Pitx1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCCAATCCCTCCA-
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A G C T A G T C G A T C C G T A C G T A A C G T A G T C A G T C A G T C C G A T A G T C A G T C C G T A A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCAATCCCTCCA
-CAAATCACTG--
 A G C T A G T C G A T C C G T A C G T A A C G T A G T C A G T C A G T C C G A T A G T C A G T C C G T A
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCCAATCCCTCCA
GNNAGCTAATCCCCCN-
 A C G T A C G T A C G T A C G T A G C T A G T C G A T C C G T A C G T A A C G T A G T C A G T C A G T C C G A T A G T C A G T C C G T A
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCAATCCCTCCA
NYTAATCCYB---
 A G C T A G T C G A T C C G T A C G T A A C G T A G T C A G T C A G T C C G A T A G T C A G T C C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCAATCCCTCCA
GCTAATCCCC---
 A G C T A G T C G A T C C G T A C G T A A C G T A G T C A G T C A G T C C G A T A G T C A G T C C G T A
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCCAATCCCTCCA
NANANTTAATCCCNNNN
 A C G T A C G T A C G T A C G T A G C T A G T C G A T C C G T A C G T A A C G T A G T C A G T C A G T C C G A T A G T C A G T C C G T A
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCCAATCCCTCCA-
----ATCACCCCAT
 A G C T A G T C G A T C C G T A C G T A A C G T A G T C A G T C A G T C C G A T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCAATCCCTCCA
CTTAATCCC----
 A G C T A G T C G A T C C G T A C G T A A C G T A G T C A G T C A G T C C G A T A G T C A G T C C G T A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCCAATCCCTCCA-
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A G C T A G T C G A T C C G T A C G T A A C G T A G T C A G T C A G T C C G A T A G T C A G T C C G T A A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCCAATCCCTCCA
--TAATCCCN---
 A G C T A G T C G A T C C G T A C G T A A C G T A G T C A G T C A G T C C G A T A G T C A G T C C G T A
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T