Information for 6-TGCACCGCGA (Motif 5)

A C G T T C A G G T A C T G C A A G T C G A T C T C A G A G T C T A C G T C G A
Reverse Opposite:
A G C T A T G C A C T G A G T C C T A G C T A G A C G T A C T G A G T C T G C A
p-value:1e-24
log p-value:-5.676e+01
Information Content per bp:1.693
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif11.63%
Number of Background Sequences with motif1577.3
Percentage of Background Sequences with motif3.47%
Average Position of motif in Targets50.1 +/- 25.8bp
Average Position of motif in Background48.9 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCACCGCGA
-AAACCGCAA
 A C G T T C A G G T A C T G C A A G T C G A T C T C A G A G T C T A C G T C G A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCACCGCGA-----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T T C A G G T A C T G C A A G T C G A T C T C A G A G T C T A C G T C G A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCACCGCGA
-GCTCCG---
 A C G T T C A G G T A C T G C A A G T C G A T C T C A G A G T C T A C G T C G A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCACCGCGA--
GGCCCCGCCCCC
 A C G T T C A G G T A C T G C A A G T C G A T C T C A G A G T C T A C G T C G A A C G T A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGCACCGCGA----
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T T C A G G T A C T G C A A G T C G A T C T C A G A G T C T A C G T C G A A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGCACCGCGA---
-GCTCCGCCCMCY
 A C G T T C A G G T A C T G C A A G T C G A T C T C A G A G T C T A C G T C G A A C G T A C G T A C G T
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCACCGCGA---
NNGCNCTGCGCGGC
 A C G T A C G T T C A G G T A C T G C A A G T C G A T C T C A G A G T C T A C G T C G A A C G T A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCACCGCGA-
-AAACCGCAAA
 A C G T T C A G G T A C T G C A A G T C G A T C T C A G A G T C T A C G T C G A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGCACCGCGA
--CACAGN--
 A C G T T C A G G T A C T G C A A G T C G A T C T C A G A G T C T A C G T C G A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCACCGCGA
TGCCCAGNHW
 A C G T T C A G G T A C T G C A A G T C G A T C T C A G A G T C T A C G T C G A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A