Information for 3-TTGTAGTTCG (Motif 3)

G C A T A C G T A C T G A C G T C G T A A C T G A C G T A G C T A G T C A C T G
Reverse Opposite:
T G A C C T A G C T G A C G T A G T A C A C G T C G T A A G T C G T C A C G T A
p-value:1e-70
log p-value:-1.621e+02
Information Content per bp:1.857
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.51%
Number of Background Sequences with motif67.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets40.8 +/- 18.8bp
Average Position of motif in Background52.1 +/- 43.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGTAGTTCG
NNTGTGGTTT-
 A C G T G C A T A C G T A C T G A C G T C G T A A C T G A C G T A G C T A G T C A C T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTGTAGTTCG
CTGTGGTTTN
 G C A T A C G T A C T G A C G T C G T A A C T G A C G T A G C T A G T C A C T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGTAGTTCG
NNHTGTGGTTWN
 A C G T A C G T G C A T A C G T A C T G A C G T C G T A A C T G A C G T A G C T A G T C A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTGTAGTTCG
GCTGTGGTTT-
 A C G T G C A T A C G T A C T G A C G T C G T A A C T G A C G T A G C T A G T C A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTAGTTCG
GGGAATTGTAGT---
 A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C T G A C G T C G T A A C T G A C G T A G C T A G T C A C T G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:6
Score:0.61
Offset:-12
Orientation:reverse strand
Alignment:------------TTGTAGTTCG
GCMTBCTGGGAGTTGTAGTY--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C T G A C G T C G T A A C T G A C G T A G C T A G T C A C T G
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTGTAGTTCG
GTCTGTGGTTT-
 A C G T A C G T G C A T A C G T A C T G A C G T C G T A A C T G A C G T A G C T A G T C A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:-12
Orientation:reverse strand
Alignment:------------TTGTAGTTCG
GCATTCTGGGAATTGTAGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C T G A C G T C G T A A C T G A C G T A G C T A G T C A C T G
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTAGTTCG
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C T G A C G T C G T A A C T G A C G T A G C T A G T C A C T G
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGTAGTTCG
TTTGCGGTTT-
 A C G T G C A T A C G T A C T G A C G T C G T A A C T G A C G T A G C T A G T C A C T G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T