Information for 17-TGCTCATATT (Motif 23)

A C G T A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C T G A G T C C G T A
p-value:1e-5
log p-value:-1.270e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 21.5bp
Average Position of motif in Background27.0 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGCTCATATT------
--CTAATATTGCTAAA
 A C G T A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGCTCATATT------
--CTAATATTGCTAAA
 A C G T A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGCTCATATT--
GKVTCADRTTWC
 A C G T A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------TGCTCATATT
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------TGCTCATATT-
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCTCATATT-
TGCTGTGATTT
 A C G T A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCTCATATT-
-GCAGTGATTT
 A C G T A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TGCTCATATT-
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGCTCATATT
AATTTGCTGAC---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTCATATT
AAAWWTGCTGACWWD
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G