Information for 6-CTATGTAGAT (Motif 11)

A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T C G T A A G T C C G T A A C G T C G T A A C T G
p-value:1e-11
log p-value:-2.715e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 30.3bp
Average Position of motif in Background31.2 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1B/MA0792.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTATGTAGAT
-TATGCAAAT
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

POU3F4/MA0789.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTATGTAGAT
-TATGCAAAT
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

POU2F1/MA0785.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTATGTAGAT-
AATATGCAAATT
 A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTATGTAGAT--
TTATGCAAATTA
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C G T A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTATGTAGAT--
-TATGTAAATAT
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTATGTAGAT---
-TATGCWAATBAV
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTATGTAGAT----
TTGTATGCAAATTAGA
 A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTATGTAGAT
TTATGCAAAT
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTATGTAGAT---
-WATGCAAATGAG
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTATGTAGAT
ATATGCAAAT
 A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C T G C G T A A C G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T