Information for 13-GAAAGGCTCYGTC (Motif 13)

A C T G C T G A C G T A T C G A A C T G A C T G A G T C C A G T A G T C A G C T C A T G A G C T G T A C
Reverse Opposite:
A C T G T C G A G T A C T C G A A C T G G T C A A C T G T A G C A G T C A G C T C G A T A G C T G T A C
p-value:1e-11
log p-value:-2.678e+01
Information Content per bp:1.771
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.5 +/- 15.8bp
Average Position of motif in Background60.3 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGCTCYGTC
GGAGAAAGGTGCGA--
 A C G T A C G T A C G T A C T G C T G A C G T A T C G A A C T G A C T G A G T C C A G T A G T C A G C T C A T G A G C T G T A C
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAAAGGCTCYGTC
-----GCTCCG--
 A C T G C T G A C G T A T C G A A C T G A C T G A G T C C A G T A G T C A G C T C A T G A G C T G T A C
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAAAGGCTCYGTC
----GGCGCGCT-
 A C T G C T G A C G T A T C G A A C T G A C T G A G T C C A G T A G T C A G C T C A T G A G C T G T A C
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGGCTCYGTC
GGAAATCCCC----
 A C G T A C T G C T G A C G T A T C G A A C T G A C T G A G T C C A G T A G T C A G C T C A T G A G C T G T A C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GAAAGGCTCYGTC---
----GGCTCYAKCAYC
 A C T G C T G A C G T A T C G A A C T G A C T G A G T C C A G T A G T C A G C T C A T G A G C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGGCTCYGTC
GGAAATTCCC----
 A C G T A C T G C T G A C G T A T C G A A C T G A C T G A G T C C A G T A G T C A G C T C A T G A G C T G T A C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGGCTCYGTC
GGAAANCCCC----
 A C G T A C T G C T G A C G T A T C G A A C T G A C T G A G T C C A G T A G T C A G C T C A T G A G C T G T A C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GAAAGGCTCYGTC
GAAAGTGAAAGT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A T C G A A C T G A C T G A G T C C A G T A G T C A G C T C A T G A G C T G T A C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GAAAGGCTCYGTC--
-----GCTCGGSCTC
 A C T G C T G A C G T A T C G A A C T G A C T G A G T C C A G T A G T C A G C T C A T G A G C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GAAAGGCTCYGTC--
NNAATTCTCGNTNAN
 A C T G C T G A C G T A T C G A A C T G A C T G A G T C C A G T A G T C A G C T C A T G A G C T G T A C A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A