Information for 7-CGGGCCGTCGTCT (Motif 9)

G T A C A C T G A C T G A C T G A G T C A G T C A C T G C G A T A G T C A T C G A G C T A G T C A C G T
Reverse Opposite:
C G T A A C T G C T G A A T G C A C T G G C T A A G T C C T A G A C T G A G T C A G T C A G T C A C T G
p-value:1e-11
log p-value:-2.565e+01
Information Content per bp:1.921
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 21.7bp
Average Position of motif in Background44.1 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGGGCCGTCGTCT--
---GCCGCCATCTTG
 G T A C A C T G A C T G A C T G A G T C A G T C A C T G C G A T A G T C A T C G A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGGGCCGTCGTCT-----
---TCCGTCGCTTAAAAG
 G T A C A C T G A C T G A C T G A G T C A G T C A C T G C G A T A G T C A T C G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

PB0131.1_Gmeb1_2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGGGCCGTCGTCT----
-TGGGCGACGTCGTTAA
 G T A C A C T G A C T G A C T G A G T C A G T C A C T G C G A T A G T C A T C G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCCGTCGTCT
TNNGGGCAG------
 A C G T A C G T G T A C A C T G A C T G A C T G A G T C A G T C A C T G C G A T A G T C A T C G A G C T A G T C A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CGGGCCGTCGTCT
NANAAGGGCGTGGTC-
 A C G T A C G T A C G T G T A C A C T G A C T G A C T G A G T C A G T C A C T G C G A T A G T C A T C G A G C T A G T C A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CGGGCCGTCGTCT
--GGCVGTTR---
 G T A C A C T G A C T G A C T G A G T C A G T C A C T G C G A T A G T C A T C G A G C T A G T C A C G T
A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CGGGCCGTCGTCT
----ACGTCATC-
 G T A C A C T G A C T G A C T G A G T C A G T C A C T G C G A T A G T C A T C G A G C T A G T C A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CGGGCCGTCGTCT--
-----VBSYGTCTGG
 G T A C A C T G A C T G A C T G A G T C A G T C A C T G C G A T A G T C A T C G A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CGGGCCGTCGTCT-
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T G T A C A C T G A C T G A C T G A G T C A G T C A C T G C G A T A G T C A T C G A G C T A G T C A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CGGGCCGTCGTCT----
-GAGCCCTTGTCCCTAA
 G T A C A C T G A C T G A C T G A G T C A G T C A C T G C G A T A G T C A T C G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G