Information for 11-TGATCCATGC (Motif 19)

A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C T G A C T G C G T A A C G T A G T C C G T A
p-value:1e-2
log p-value:-5.704e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 23.0bp
Average Position of motif in Background30.9 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGATCCATGC
ATAATCCC---
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGATCCATGC
TAATCGATAA
 A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGATCCATGC
DGATCRATAN
 A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGATCCATGC
NTTGATACATT-
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGATCCATGC
TGATTGATGA
 A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGATCCATGC
TAATCGATAA
 A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGATCCATGC-
ATGATKGATGRC
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

FOS/MA0476.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGATCCATGC
TGTGACTCATT-
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGATCCATGC-
TGATTTATGGC
 A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C G T
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

JUND/MA0491.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGATCCATGC
GGTGACTCATC-
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C T G A G T C
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T