Information for 6-GATTTTCACC (Motif 12)

A C T G G T C A C G A T A C G T G C A T A C G T G T A C C G T A A T G C G T A C
Reverse Opposite:
A C T G A T C G C G A T A C T G C G T A C G T A C G T A C G T A C A G T A G T C
p-value:1e-10
log p-value:-2.380e+01
Information Content per bp:1.851
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif37.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets50.3 +/- 22.9bp
Average Position of motif in Background45.0 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GATTTTCACC-
-ATTAACACCT
 A C T G G T C A C G A T A C G T G C A T A C G T G T A C C G T A A T G C G T A C A C G T
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GATTTTCACC--
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C G T A C T G G T C A C G A T A C G T G C A T A C G T G T A C C G T A A T G C G T A C A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATTTTCACC---
-ACTTTCACTTTC
 A C T G G T C A C G A T A C G T G C A T A C G T G T A C C G T A A T G C G T A C A C G T A C G T A C G T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GATTTTCACC
CNGTGATTTN----
 A C G T A C G T A C G T A C G T A C T G G T C A C G A T A C G T G C A T A C G T G T A C C G T A A T G C G T A C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GATTTTCACC-
-KTTCACACCT
 A C T G G T C A C G A T A C G T G C A T A C G T G T A C C G T A A T G C G T A C A C G T
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GATTTTCACC--
--TTMACACCTT
 A C T G G T C A C G A T A C G T G C A T A C G T G T A C C G T A A T G C G T A C A C G T A C G T
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GATTTTCACC-
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G A T A C G T G C A T A C G T G T A C C G T A A T G C G T A C A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GATTTTCACC--
-TTTCACACCTN
 A C T G G T C A C G A T A C G T G C A T A C G T G T A C C G T A A T G C G T A C A C G T A C G T
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GATTTTCACC-------
NNTTTTCACACCTTNNN
 A C T G G T C A C G A T A C G T G C A T A C G T G T A C C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

PH0017.1_Cux1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GATTTTCACC-
TAGTGATCATCATTA
 A C G T A C G T A C G T A C G T A C T G G T C A C G A T A C G T G C A T A C G T G T A C C G T A A T G C G T A C A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A