Information for 14-CCTACGAMCCGGC (Motif 18)

A G T C A G T C A G C T C G T A A G T C C T A G G T C A G T A C A T G C G T A C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A T C G A C G T A C G T A G T C T A C G A C G T C T G A A C T G A C T G
p-value:1e-8
log p-value:-1.935e+01
Information Content per bp:1.844
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 32.6bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCTACGAMCCGGC
TGACCTCTGACCCCN-
 A C G T A C G T A C G T A G T C A G T C A G C T C G T A A G T C C T A G G T C A G T A C A T G C G T A C A C T G A C T G A G T C
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCTACGAMCCGGC
SCCTAGCAACAG--
 A C G T A G T C A G T C A G C T C G T A A G T C C T A G G T C A G T A C A T G C G T A C A C T G A C T G A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:3
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CCTACGAMCCGGC---
-CTACGCCCACGCACT
 A G T C A G T C A G C T C G T A A G T C C T A G G T C A G T A C A T G C G T A C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

TFCP2/MA0145.3/Jaspar

Match Rank:4
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CCTACGAMCCGGC--
-----AAACCGGTTT
 A G T C A G T C A G C T C G T A A G T C C T A G G T C A G T A C A T G C G T A C A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCTACGAMCCGGC---
NNNNTGACCCGGCGCG
 A G T C A G T C A G C T C G T A A G T C C T A G G T C A G T A C A T G C G T A C A C T G A C T G A G T C A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCTACGAMCCGGC---
NNCNTGACCCCGCTCT
 A G T C A G T C A G C T C G T A A G T C C T A G G T C A G T A C A T G C G T A C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CCTACGAMCCGGC------
--TACGCCCCGCCACTCTG
 A G T C A G T C A G C T C G T A A G T C C T A G G T C A G T A C A T G C G T A C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CCTACGAMCCGGC
TGTTKCCTAGCAACM---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T C G T A A G T C C T A G G T C A G T A C A T G C G T A C A C T G A C T G A G T C
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CCTACGAMCCGGC
CCGCATAGCAACGGA-
 A C G T A C G T A C G T A G T C A G T C A G C T C G T A A G T C C T A G G T C A G T A C A T G C G T A C A C T G A C T G A G T C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:10
Score:0.47
Offset:6
Orientation:forward strand
Alignment:CCTACGAMCCGGC----
------ACCCGGATGTA
 A G T C A G T C A G C T C G T A A G T C C T A G G T C A G T A C A T G C G T A C A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A