Information for 3-AAGGWCTCCCTGTACC (Motif 6)

C G T A C G T A A T C G C T A G C G A T A T G C A C G T A G T C A T G C A G T C C G A T A T C G A G C T T G C A G T A C G T A C
Reverse Opposite:
A C T G A C T G A C G T C T G A A T G C C G T A A C T G A T C G C T A G G T C A A T C G G C T A A G T C A T G C C G A T A C G T
p-value:1e-13
log p-value:-3.079e+01
Information Content per bp:1.737
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 19.4bp
Average Position of motif in Background58.6 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGGWCTCCCTGTACC
VAGRACAKNCTGTBC-
 C G T A C G T A A T C G C T A G C G A T A T G C A C G T A G T C A T G C A G T C C G A T A T C G A G C T T G C A G T A C G T A C
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGGWCTCCCTGTACC
NAGAACAGNCTGTNCT
 C G T A C G T A A T C G C T A G C G A T A T G C A C G T A G T C A T G C A G T C C G A T A T C G A G C T T G C A G T A C G T A C
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAGGWCTCCCTGTACC
NAGNACANNNTGTNCT
 C G T A C G T A A T C G C T A G C G A T A T G C A C G T A G T C A T G C A G T C C G A T A T C G A G C T T G C A G T A C G T A C
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AAGGWCTCCCTGTACC
--------GCTGTG--
 C G T A C G T A A T C G C T A G C G A T A T G C A C G T A G T C A T G C A G T C C G A T A T C G A G C T T G C A G T A C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAGGWCTCCCTGTACC
VAGRACAKWCTGTYC-
 C G T A C G T A A T C G C T A G C G A T A T G C A C G T A G T C A T G C A G T C C G A T A T C G A G C T T G C A G T A C G T A C
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:AAGGWCTCCCTGTACC---
---------CTGTTCCTGG
 C G T A C G T A A T C G C T A G C G A T A T G C A C G T A G T C A T G C A G T C C G A T A T C G A G C T T G C A G T A C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AAGGWCTCCCTGTACC
----ACTTCCTGTT--
 C G T A C G T A A T C G C T A G C G A T A T G C A C G T A G T C A T G C A G T C C G A T A T C G A G C T T G C A G T A C G T A C
A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AAGGWCTCCCTGTACC
---CACTTCCTGT---
 C G T A C G T A A T C G C T A G C G A T A T G C A C G T A G T C A T G C A G T C C G A T A T C G A G C T T G C A G T A C G T A C
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AAGGWCTCCCTGTACC-
NGGTACACNGTGTTCCC
 C G T A C G T A A T C G C T A G C G A T A T G C A C G T A G T C A T G C A G T C C G A T A T C G A G C T T G C A G T A C G T A C A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AAGGWCTCCCTGTACC
-AGGTCACCCTGACCT
 C G T A C G T A A T C G C T A G C G A T A T G C A C G T A G T C A T G C A G T C C G A T A T C G A G C T T G C A G T A C G T A C
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T