p-value: | 1e-15 |
log p-value: | -3.508e+01 |
Information Content per bp: | 1.761 |
Number of Target Sequences with motif | 15.0 |
Percentage of Target Sequences with motif | 1.63% |
Number of Background Sequences with motif | 31.5 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 39.7 +/- 27.2bp |
Average Position of motif in Background | 53.6 +/- 34.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.07 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFY(CCAAT)/Promoter/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTCCTATTGGTCA --CCGATTGGCT- |
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SOX9/MA0077.1/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTCCTATTGGTCA ---CCATTGTTC- |
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NFYB/MA0502.1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTCCTATTGGTCA---- --CTGATTGGTCNATTT |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTCCTATTGGTCA--- ANNTCTATTGTTCNNNA |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCCTATTGGTCA --NCCATTGTTC- |
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NFYA/MA0060.2/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TTCCTATTGGTCA- AGAGTGCTGATTGGTCCA |
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POL004.1_CCAAT-box/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTCCTATTGGTCA-- ---TGATTGGCTANN |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTCCTATTGGTCA----- TNNANNTCTATTGTTNTNNANN |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTCCTATTGGTCA--- NNTTTATTGTTCTNNN |
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PB0132.1_Hbp1_2/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTCCTATTGGTCA-- TGTTCCCATTGTGTACT |
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