Information for 4-CTTCCATCTT (Motif 9)

A G T C C G A T A C G T A G T C A G T C C G T A A G C T G T A C A C G T A G C T
Reverse Opposite:
C T G A C G T A A C T G C T G A C G A T C T A G A C T G G T C A G C T A A C T G
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.857
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.97%
Number of Background Sequences with motif83.5
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets39.1 +/- 25.5bp
Average Position of motif in Background51.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCATCTT-
GCNGCCATCTTG
 A C G T A G T C C G A T A C G T A G T C A G T C C G T A A G C T G T A C A C G T A G C T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCATCTT-
GCCGCCATCTTG
 A C G T A G T C C G A T A C G T A G T C A G T C C G T A A G C T G T A C A C G T A G C T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCATCTT-
CCTTTGATCTTT
 A C G T A G T C C G A T A C G T A G T C A G T C C G T A A G C T G T A C A C G T A G C T A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTTCCATCTT-
AACCCTTTGATCTTT
 A C G T A C G T A C G T A C G T A G T C C G A T A C G T A G T C A G T C C G T A A G C T G T A C A C G T A G C T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTTCCATCTT
GYCATCMATCAT
 A C G T A C G T A G T C C G A T A C G T A G T C A G T C C G T A A G C T G T A C A C G T A G C T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCATCTT
ACTTCCTBGT-
 A C G T A G T C C G A T A C G T A G T C A G T C C G T A A G C T G T A C A C G T A G C T
T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTTCCATCTT
GCTTCC-----
 A C G T A G T C C G A T A C G T A G T C A G T C C G T A A G C T G T A C A C G T A G C T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCATCTT
ACTTCCTGNT-
 A C G T A G T C C G A T A C G T A G T C A G T C C G T A A G C T G T A C A C G T A G C T
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCATCTT
ACTTCCTGBT-
 A C G T A G T C C G A T A C G T A G T C A G T C C G T A A G C T G T A C A C G T A G C T
C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTCCATCTT--
TACTTCCTCTTTTN
 A C G T A C G T A G T C C G A T A C G T A G T C A G T C C G T A A G C T G T A C A C G T A G C T A C G T A C G T
C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T