Information for 4-ACGGCTTGGTTAC (Motif 8)

C G T A T G A C T A C G A C T G A G T C A G C T C G A T A C T G A C T G G A C T C A G T C G T A A T G C
Reverse Opposite:
A T C G G A C T G T C A C T G A A G T C A G T C G C T A C T G A A C T G A G T C A G T C A C T G G A C T
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.735
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif53.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets44.4 +/- 16.2bp
Average Position of motif in Background55.5 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0158.1_Rfx3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ACGGCTTGGTTAC-------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T C G T A T G A C T A C G A C T G A G T C A G C T C G A T A C T G A C T G G A C T C A G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACGGCTTGGTTAC-----
-CTACTTGGATACGGAAT
 C G T A T G A C T A C G A C T G A G T C A G C T C G A T A C T G A C T G G A C T C A G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACGGCTTGGTTAC---
-TACCCTAGTTACCGA
 C G T A T G A C T A C G A C T G A G T C A G C T C G A T A C T G A C T G G A C T C A G T C G T A A T G C A C G T A C G T A C G T
A C G T G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACGGCTTGGTTAC
--NGCTN------
 C G T A T G A C T A C G A C T G A G T C A G C T C G A T A C T G A C T G G A C T C A G T C G T A A T G C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACGGCTTGGTTAC
--GGCGCGCT---
 C G T A T G A C T A C G A C T G A G T C A G C T C G A T A C T G A C T G G A C T C A G T C G T A A T G C
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACGGCTTGGTTAC
---GCTCGGSCTC
 C G T A T G A C T A C G A C T G A G T C A G C T C G A T A C T G A C T G G A C T C A G T C G T A A T G C
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACGGCTTGGTTAC-
KGTTGCTAGGMAACA
 A C G T C G T A T G A C T A C G A C T G A G T C A G C T C G A T A C T G A C T G G A C T C A G T C G T A A T G C A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACGGCTTGGTTAC--
---SCCTAGCAACAG
 C G T A T G A C T A C G A C T G A G T C A G C T C G A T A C T G A C T G G A C T C A G T C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Klf12/MA0742.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ACGGCTTGGTTAC
NANAAGGGCGTGGTC--
 A C G T A C G T A C G T A C G T C G T A T G A C T A C G A C T G A G T C A G C T C G A T A C T G A C T G G A C T C A G T C G T A A T G C
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACGGCTTGGTTAC
NAACAGCTGG-----
 A C G T A C G T C G T A T G A C T A C G A C T G A G T C A G C T C G A T A C T G A C T G G A C T C A G T C G T A A T G C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T