Information for 7-CGGCGCGGAGAGRYGA (Motif 6)

A T G C A C T G C A T G A G T C C T A G A G T C A C T G A C T G T G C A T A C G G C T A A C T G C T G A A G C T A T C G T G C A
Reverse Opposite:
A C G T A T G C C T G A A G C T A G T C C G A T A T G C A C G T A G T C A G T C A C T G A G T C A C T G G T A C A G T C A T C G
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.773
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 24.9bp
Average Position of motif in Background73.5 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0202.1_Zfp410_2/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGCGGAGAGRYGA
NNTNNGGGGCGGNGNGN---
 A C G T A C G T A C G T A C G T A T G C A C T G C A T G A G T C C T A G A G T C A C T G A C T G T G C A T A C G G C T A A C T G C T G A A G C T A T C G T G C A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGCGCGGAGAGRYGA
-GGCGCGCT-------
 A T G C A C T G C A T G A G T C C T A G A G T C A C T G A C T G T G C A T A C G G C T A A C T G C T G A A G C T A T C G T G C A
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGCGGAGAGRYGA
NNGCNCTGCGCGGC-------
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G C A T G A G T C C T A G A G T C A C T G A C T G T G C A T A C G G C T A A C T G C T G A A G C T A T C G T G C A
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGCGGAGAGRYGA
NNTNAGGGGCGGNNNN----
 A C G T A C G T A C G T A C G T A T G C A C T G C A T G A G T C C T A G A G T C A C T G A C T G T G C A T A C G G C T A A C T G C T G A A G C T A T C G T G C A
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGGCGCGGAGAGRYGA
CTTCGCGGGGGGTC--
 A T G C A C T G C A T G A G T C C T A G A G T C A C T G A C T G T G C A T A C G G C T A A C T G C T G A A G C T A T C G T G C A
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGGCGCGGAGAGRYGA
GGGGGCGGGGCC----
 A T G C A C T G C A T G A G T C C T A G A G T C A C T G A C T G T G C A T A C G G C T A A C T G C T G A A G C T A T C G T G C A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CGGCGCGGAGAGRYGA
ATAAGGGCGCGCGAT-----
 A C G T A C G T A C G T A C G T A T G C A C T G C A T G A G T C C T A G A G T C A C T G A C T G T G C A T A C G G C T A A C T G C T G A A G C T A T C G T G C A
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CGGCGCGGAGAGRYGA
RGKGGGCGGAGC-----
 A C G T A T G C A C T G C A T G A G T C C T A G A G T C A C T G A C T G T G C A T A C G G C T A A C T G C T G A A G C T A T C G T G C A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CGGCGCGGAGAGRYGA
GGGGGCGGGGC-----
 A T G C A C T G C A T G A G T C C T A G A G T C A C T G A C T G T G C A T A C G G C T A A C T G C T G A A G C T A T C G T G C A
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CGGCGCGGAGAGRYGA
ATAAAGGCGCGCGAT-----
 A C G T A C G T A C G T A C G T A T G C A C T G C A T G A G T C C T A G A G T C A C T G A C T G T G C A T A C G G C T A A C T G C T G A A G C T A T C G T G C A
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T A C G T A C G T