Information for 1-SSBNAGGCCT (Motif 1)

T A C G A T C G A T G C A T G C T G C A A C T G A C T G A G T C A G T C A G C T
Reverse Opposite:
T C G A A C T G A C T G A G T C A G T C A C G T T A C G T A C G A T G C A T G C
p-value:1e-17
log p-value:-3.997e+01
Information Content per bp:1.689
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif27.89%
Number of Background Sequences with motif5051.8
Percentage of Background Sequences with motif10.83%
Average Position of motif in Targets53.5 +/- 24.6bp
Average Position of motif in Background49.6 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:SSBNAGGCCT
--CNAGGCCT
 T A C G A T C G A T G C A T G C T G C A A C T G A C T G A G T C A G T C A G C T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:SSBNAGGCCT
--CTAGGCCT
 T A C G A T C G A T G C A T G C T G C A A C T G A C T G A G T C A G T C A G C T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---SSBNAGGCCT-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T T A C G A T C G A T G C A T G C T G C A A C T G A C T G A G T C A G T C A G C T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--SSBNAGGCCT
CGCCTCAGGCA-
 A C G T A C G T T A C G A T C G A T G C A T G C T G C A A C T G A C T G A G T C A G T C A G C T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--SSBNAGGCCT---
NNGGCCACGCCTTTN
 A C G T A C G T T A C G A T C G A T G C A T G C T G C A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--SSBNAGGCCT
AGCCTCAGGCA-
 A C G T A C G T T A C G A T C G A T G C A T G C T G C A A C T G A C T G A G T C A G T C A G C T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--SSBNAGGCCT
AGCCTCAGGCA-
 A C G T A C G T T A C G A T C G A T G C A T G C T G C A A C T G A C T G A G T C A G T C A G C T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-SSBNAGGCCT-
SCCTSAGGSCAW
 A C G T T A C G A T C G A T G C A T G C T G C A A C T G A C T G A G T C A G T C A G C T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:SSBNAGGCCT---
-----GGCGCGCT
 T A C G A T C G A T G C A T G C T G C A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:SSBNAGGCCT-
-GCTCGGSCTC
 T A C G A T C G A T G C A T G C T G C A A C T G A C T G A G T C A G T C A G C T A C G T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C