Information for 8-TCGAACACTA (Motif 40)

C G A T T A G C C T A G T G C A G T C A T G A C C G T A G T A C G C A T G C T A
Reverse Opposite:
C G A T C G T A A C T G A C G T A C T G C A G T A C G T A G T C A T C G C G T A
p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.696
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif602.3
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets51.4 +/- 27.5bp
Average Position of motif in Background50.0 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCGAACACTA----
CGAAGCACACAAAATA
 A C G T A C G T C G A T T A G C C T A G T G C A G T C A T G A C C G T A G T A C G C A T G C T A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCGAACACTA----
TTTAGAACAATAAAAT
 A C G T A C G T C G A T T A G C C T A G T G C A G T C A T G A C C G T A G T A C G C A T G C T A A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCGAACACTA----
CATAAGACCACCATTAC
 A C G T A C G T A C G T C G A T T A G C C T A G T G C A G T C A T G A C C G T A G T A C G C A T G C T A A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCGAACACTA
CCAGGAACAG--
 A C G T A C G T C G A T T A G C C T A G T G C A G T C A T G A C C G T A G T A C G C A T G C T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCGAACACTA--
GCGACCACACTG
 C G A T T A G C C T A G T G C A G T C A T G A C C G T A G T A C G C A T G C T A A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCGAACACTA----
TTAAGAACAATAAATT
 A C G T A C G T C G A T T A G C C T A G T G C A G T C A T G A C C G T A G T A C G C A T G C T A A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCGAACACTA----
NNNNNGAACAATTGANN
 A C G T A C G T A C G T C G A T T A G C C T A G T G C A G T C A T G A C C G T A G T A C G C A T G C T A A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCGAACACTA-
GGCGACCACCGA
 A C G T C G A T T A G C C T A G T G C A G T C A T G A C C G T A G T A C G C A T G C T A A C G T
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCGAACACTA
---AACAAT-
 C G A T T A G C C T A G T G C A G T C A T G A C C G T A G T A C G C A T G C T A
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TCGAACACTA
TATCATTAGAACGCT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A G C C T A G T G C A G T C A T G A C C G T A G T A C G C A T G C T A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T