Information for 18-CGCGGAGAGCGMAGAG (Motif 30)

T A G C A C T G A T G C T A C G A C T G C G T A A C T G C G T A A C T G A T G C A C T G T G C A G T C A C T A G C G T A A T C G
Reverse Opposite:
A T G C A C G T A G T C C A G T A C G T A G T C A T C G G T A C A C G T A G T C C G A T T G A C A G T C A T C G G T A C A T C G
p-value:1e-9
log p-value:-2.094e+01
Information Content per bp:1.739
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 27.7bp
Average Position of motif in Background41.1 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGCGGAGAGCGMAGAG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T T A G C A C T G A T G C T A C G A C T G C G T A A C T G C G T A A C T G A T G C A C T G T G C A G T C A C T A G C G T A A T C G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGCGGAGAGCGMAGAG
GCCGCGCAGTGCGT----
 A C G T A C G T T A G C A C T G A T G C T A C G A C T G C G T A A C T G C G T A A C T G A T G C A C T G T G C A G T C A C T A G C G T A A T C G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CGCGGAGAGCGMAGAG-
-----RGKGGGCGGAGC
 T A G C A C T G A T G C T A C G A C T G C G T A A C T G C G T A A C T G A T G C A C T G T G C A G T C A C T A G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.45
Offset:6
Orientation:forward strand
Alignment:CGCGGAGAGCGMAGAG----
------TAGGGCAAAGGTCA
 T A G C A C T G A T G C T A C G A C T G C G T A A C T G C G T A A C T G A T G C A C T G T G C A G T C A C T A G C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.45
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGAGAGCGMAGAG
NNNACCGAGAGTNNN---
 A C G T A C G T T A G C A C T G A T G C T A C G A C T G C G T A A C T G C G T A A C T G A T G C A C T G T G C A G T C A C T A G C G T A A T C G
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.45
Offset:4
Orientation:forward strand
Alignment:CGCGGAGAGCGMAGAG
----GGGCGGGAAGG-
 T A G C A C T G A T G C T A C G A C T G C G T A A C T G C G T A A C T G A T G C A C T G T G C A G T C A C T A G C G T A A T C G
A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.45
Offset:5
Orientation:forward strand
Alignment:CGCGGAGAGCGMAGAG----
-----AGGGGTCAGAGGTCA
 T A G C A C T G A T G C T A C G A C T G C G T A A C T G C G T A A C T G A T G C A C T G T G C A G T C A C T A G C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

PB0127.1_Gata6_2/Jaspar

Match Rank:8
Score:0.45
Offset:-1
Orientation:forward strand
Alignment:-CGCGGAGAGCGMAGAG
GCGGCGATATCGCAGCG
 A C G T T A G C A C T G A T G C T A C G A C T G C G T A A C T G C G T A A C T G A T G C A C T G T G C A G T C A C T A G C G T A A T C G
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.44
Offset:0
Orientation:forward strand
Alignment:CGCGGAGAGCGMAGAG
TGCGGAGTGGGACTGG
 T A G C A C T G A T G C T A C G A C T G C G T A A C T G C G T A A C T G A T G C A C T G T G C A G T C A C T A G C G T A A T C G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

CENPB/MA0637.1/Jaspar

Match Rank:10
Score:0.44
Offset:-2
Orientation:forward strand
Alignment:--CGCGGAGAGCGMAGAG
CCCGCATACAACGAA---
 A C G T A C G T T A G C A C T G A T G C T A C G A C T G C G T A A C T G C G T A A C T G A T G C A C T G T G C A G T C A C T A G C G T A A T C G
G A T C G A T C G A T C A C T G A G T C C G T A G A C T T G C A T A G C G C T A T C G A G T A C T C A G G C T A G T C A A C G T A C G T A C G T