Information for 1-CAAGACACTCCCCAAA (Motif 1)

A G T C G T C A C G T A A C T G C G T A G T A C C G T A A G T C A G C T A G T C A G T C A G T C A G T C C T G A C T G A C G T A
Reverse Opposite:
A C G T A G C T A G C T C T A G A C T G C T A G A C T G C T G A C T A G C G A T A C T G C G A T A G T C A C G T A C G T C T A G
p-value:1e-16
log p-value:-3.848e+01
Information Content per bp:1.821
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.8 +/- 20.1bp
Average Position of motif in Background62.9 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAAGACACTCCCCAAA
--GGAAATTCCC----
 A G T C G T C A C G T A A C T G C G T A G T A C C G T A A G T C A G C T A G T C A G T C A G T C A G T C C T G A C T G A C G T A
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:CAAGACACTCCCCAAA
--------TCCCCA--
 A G T C G T C A C G T A A C T G C G T A G T A C C G T A A G T C A G C T A G T C A G T C A G T C A G T C C T G A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAAGACACTCCCCAAA
--GGAAATTCCC----
 A G T C G T C A C G T A A C T G C G T A G T A C C G T A A G T C A G C T A G T C A G T C A G T C A G T C C T G A C T G A C G T A
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CAAGACACTCCCCAAA
CAAATCCAGACATCACA----
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C T G C G T A G T A C C G T A A G T C A G C T A G T C A G T C A G T C A G T C C T G A C T G A C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAAGACACTCCCCAAA-
TACGAGACTCCTCTAAC
 A G T C G T C A C G T A A C T G C G T A G T A C C G T A A G T C A G C T A G T C A G T C A G T C A G T C C T G A C T G A C G T A A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CAAGACACTCCCCAAA-
------TTTCCTGGAAA
 A G T C G T C A C G T A A C T G C G T A G T A C C G T A A G T C A G C T A G T C A G T C A G T C A G T C C T G A C T G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CAAGACACTCCCCAAA-
------TTTCCCAGAAN
 A G T C G T C A C G T A A C T G C G T A G T A C C G T A A G T C A G C T A G T C A G T C A G T C A G T C C T G A C T G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAAGACACTCCCCAAA
--GGACACACCCCC--
 A G T C G T C A C G T A A C T G C G T A G T A C C G T A A G T C A G C T A G T C A G T C A G T C A G T C C T G A C T G A C G T A
A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CAAGACACTCCCCAAA
-TAGAANVTTCTAGAA
 A G T C G T C A C G T A A C T G C G T A G T A C C G T A A G T C A G C T A G T C A G T C A G T C A G T C C T G A C T G A C G T A
A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CAAGACACTCCCCAAA
CCAGACRSVB------
 A G T C G T C A C G T A A C T G C G T A G T A C C G T A A G T C A G C T A G T C A G T C A G T C A G T C C T G A C T G A C G T A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T