Information for 3-YCAGMCTCTKGYA (Motif 7)

A G C T A T G C C G T A A C T G G T C A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T C T A G A G T C G T C A G T C A A C T G C G T A A C T G A C G T A G T C C G A T A T C G C T G A
p-value:1e-12
log p-value:-2.776e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 29.0bp
Average Position of motif in Background52.8 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:YCAGMCTCTKGYA
BCAGACWA-----
 A G C T A T G C C G T A A C T G G T C A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:YCAGMCTCTKGYA----
-CAATCACTGGCAGAAT
 A G C T A T G C C G T A A C T G G T C A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:YCAGMCTCTKGYA
--AGCCTCAGGCA
 A G C T A T G C C G T A A C T G G T C A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:YCAGMCTCTKGYA
CCAGACAG-----
 A G C T A T G C C G T A A C T G G T C A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:YCAGMCTCTKGYA-
----GGTCTGGCAT
 A G C T A T G C C G T A A C T G G T C A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:YCAGMCTCTKGYA---
TAAGCCACTTGAAATT
 A G C T A T G C C G T A A C T G G T C A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YCAGMCTCTKGYA
--CGCCTCAGGCA
 A G C T A T G C C G T A A C T G G T C A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--YCAGMCTCTKGYA--
TACGAGACTCCTCTAAC
 A C G T A C G T A G C T A T G C C G T A A C T G G T C A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YCAGMCTCTKGYA
--AGCCTCAGGCA
 A G C T A T G C C G T A A C T G G T C A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

POL002.1_INR/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:YCAGMCTCTKGYA
TCAGTCTT-----
 A G C T A T G C C G T A A C T G G T C A A G T C A C G T A G T C A C G T A C G T A C T G A G T C C G T A
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T