Information for 1-GTAGGCATGTGTT (Motif 5)

A C T G C A G T T C G A C T A G A C T G A G T C C T G A A C G T A C T G A C G T A C T G A G C T A C G T
Reverse Opposite:
G T C A C T G A A G T C C G T A A G T C G T C A A G C T A C T G A G T C G A T C A C G T G T C A G T A C
p-value:1e-12
log p-value:-2.788e+01
Information Content per bp:1.802
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.0 +/- 25.6bp
Average Position of motif in Background72.7 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GTAGGCATGTGTT-
----CCATGTGCTT
 A C T G C A G T T C G A C T A G A C T G A G T C C T G A A C G T A C T G A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTAGGCATGTGTT-
--SDGCAGGTGCNS
 A C T G C A G T T C G A C T A G A C T G A G T C C T G A A C G T A C T G A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TCF3/MA0522.2/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GTAGGCATGTGTT
---NNCAGGTGTN
 A C T G C A G T T C G A C T A G A C T G A G T C C T G A A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GTAGGCATGTGTT
---AACAGGTGT-
 A C T G C A G T T C G A C T A G A C T G A G T C C T G A A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GTAGGCATGTGTT
---GACAGGTGTN
 A C T G C A G T T C G A C T A G A C T G A G T C C T G A A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTAGGCATGTGTT
-AAGGCAAGTGT-
 A C T G C A G T T C G A C T A G A C T G A G T C C T G A A C G T A C T G A C G T A C T G A G C T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

MAX/MA0058.3/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GTAGGCATGTGTT
---NNCACGTGGT
 A C T G C A G T T C G A C T A G A C T G A G T C C T G A A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A C G T A C G T C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T

MNT/MA0825.1/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GTAGGCATGTGTT
---NGCACGTGNT
 A C T G C A G T T C G A C T A G A C T G A G T C C T G A A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A C G T A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T

CLOCK/MA0819.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GTAGGCATGTGTT
---AACACGTGTT
 A C T G C A G T T C G A C T A G A C T G A G T C C T G A A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A C G T A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GTAGGCATGTGTT
---NNCAGGTGCG
 A C T G C A G T T C G A C T A G A C T G A G T C C T G A A C G T A C T G A C G T A C T G A G C T A C G T
A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G