Information for 13-GAATGTGAAC (Motif 45)

A C T G C G T A C G T A A G C T T C A G A C G T A C T G C T G A C G T A A G T C
Reverse Opposite:
A C T G A C G T A G C T A G T C C G T A A G T C C T G A A C G T A C G T A G T C
p-value:1e-5
log p-value:-1.181e+01
Information Content per bp:1.914
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif65.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets53.6 +/- 25.2bp
Average Position of motif in Background49.3 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------GAATGTGAAC
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G C T T C A G A C G T A C T G C T G A C G T A A G T C
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GAATGTGAAC
NTGGAATGTN---
 A C G T A C G T A C G T A C T G C G T A C G T A A G C T T C A G A C G T A C T G C T G A C G T A A G T C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GAATGTGAAC
NTGGAATGTG---
 A C G T A C G T A C G T A C T G C G T A C G T A A G C T T C A G A C G T A C T G C T G A C G T A A G T C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAATGTGAAC--
GAAAGTGAAAGT
 A C T G C G T A C G T A A G C T T C A G A C G T A C T G C T G A C G T A A G T C A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

Foxk1/MA0852.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAATGTGAAC------
AAAATGTAAACAAACAG
 A C G T A C T G C G T A C G T A A G C T T C A G A C G T A C T G C T G A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAATGTGAAC------
AAAATGTAAACAAACAG
 A C G T A C T G C G T A C G T A A G C T T C A G A C G T A C T G C T G A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAATGTGAAC-----
NNGTATGTGCACATNNN
 A C G T A C G T A C T G C G T A C G T A A G C T T C A G A C G T A C T G C T G A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAATGTGAAC--
GAAACTGAAACT
 A C T G C G T A C G T A A G C T T C A G A C G T A C T G C T G A C G T A A G T C A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1/MA0050.2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GAATGTGAAC------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G C T T C A G A C G T A C T G C T G A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAATGTGAAC-------
GGAAAGCGAAACCAAAAC
 A C G T A C T G C G T A C G T A A G C T T C A G A C G T A C T G C T G A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C