Information for 19-TGTGTSTGHYWTRTGT (Motif 43)

C G A T A C T G A C G T A T C G A G C T A T C G A G C T A T C G G C A T A G T C C G A T G A C T T C G A A G C T C A T G A C G T
Reverse Opposite:
T G C A G T A C C T G A A G C T C T G A G C T A T C A G C G T A T A G C T C G A A T G C T C G A A T G C G T C A A G T C C G T A
p-value:1e-6
log p-value:-1.452e+01
Information Content per bp:1.604
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif383.4
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets43.8 +/- 26.5bp
Average Position of motif in Background49.1 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTSTGHYWTRTGT
NNGCGTGTGTGCNGCN---
 A C G T A C G T A C G T C G A T A C T G A C G T A T C G A G C T A T C G A G C T A T C G G C A T A G T C C G A T G A C T T C G A A G C T C A T G A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGTSTGHYWTRTGT
NNNCCATTGTGTNAN--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A T C G A G C T A T C G A G C T A T C G G C A T A G T C C G A T G A C T T C G A A G C T C A T G A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGTGTSTGHYWTRTGT
CTGTCTGTCACCT----
 A C G T C G A T A C T G A C G T A T C G A G C T A T C G A G C T A T C G G C A T A G T C C G A T G A C T T C G A A G C T C A T G A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTSTGHYWTRTGT
NNNNTTGTGTGCTTNN-----
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A T C G A G C T A T C G A G C T A T C G G C A T A G T C C G A T G A C T T C G A A G C T C A T G A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGTGTSTGHYWTRTGT
TGTCTGDCACCT----
 C G A T A C T G A C G T A T C G A G C T A T C G A G C T A T C G G C A T A G T C C G A T G A C T T C G A A G C T C A T G A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGTGTSTGHYWTRTGT
TGGGTGTGGC------
 C G A T A C T G A C G T A T C G A G C T A T C G A G C T A T C G G C A T A G T C C G A T G A C T T C G A A G C T C A T G A C G T
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGTGTSTGHYWTRTGT
NTGGGTGTGGCC-----
 A C G T C G A T A C T G A C G T A T C G A G C T A T C G A G C T A T C G G C A T A G T C C G A T G A C T T C G A A G C T C A T G A C G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGTGTSTGHYWTRTGT
CTGTCTGG---------
 A C G T C G A T A C T G A C G T A T C G A G C T A T C G A G C T A T C G G C A T A G T C C G A T G A C T T C G A A G C T C A T G A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TGTGTSTGHYWTRTGT
VBSYGTCTGG---------
 A C G T A C G T A C G T C G A T A C T G A C G T A T C G A G C T A T C G A G C T A T C G G C A T A G T C C G A T G A C T T C G A A G C T C A T G A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGTGTSTGHYWTRTGT
TGGGTGTGGCN-----
 C G A T A C T G A C G T A T C G A G C T A T C G A G C T A T C G G C A T A G T C C G A T G A C T T C G A A G C T C A T G A C G T
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T